RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 ASPAP45381 313 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 MTTPP55157 894 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 HDAC4P56524 1084 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 CDR2LQ86X02 465 aaPredicted RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 RDM1Q8NG50 284 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ATXN7L3BQ96GX2 97 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 ZNF668Q96K58 619 aaPredicted RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 EPB41L1Q9H4G0 881 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 SLC38A10Q9HBR0 1119 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 BTBD7Q9P203 1132 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 PSMD13Q9UNM6 376 aa16.91■□□□□ 0.3
EFEMP1-202ENST00000394555 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 A0A0J9YVX5 310 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 M0QYV0 167 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 MAGEB3O15480 346 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 ADCY6O43306 1168 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 F7P08709 466 aaPredicted RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 CDK4P11802 303 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 SERPINB9P50453 376 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 MYBPC1Q00872 1141 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 XKR3Q5GH77 459 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 FAM47CQ5HY64 1035 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 VSIG10LQ86VR7 867 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 BRSK2Q8IWQ3 736 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 H3BSA7 217 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 PEX1O43933 1283 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 RALBP11234 206 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 ADARP55265 1226 aaKnown RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 PKNOX1P55347 436 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 CYLC2Q14093 348 aaPredicted RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 CYTH1Q15438 398 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 RXFP2Q8WXD0 754 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 APBB2Q92870 758 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 PIWIL1Q96J94 861 aaKnown RBP16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 SIKE1Q9BRV8 207 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 PORCNQ9H237 461 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 TMEM216Q9P0N5 145 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 HMGXB4Q9UGU5 601 aa16.9■□□□□ 0.3
EFEMP1-202ENST00000394555 NEMP1O14524 444 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 APOL1O14791 398 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 ZSCAN9O15535 394 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 AP1G1O43747 822 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 STRNO43815 780 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 NAMPTP43490 491 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 ACAP1Q15027 740 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 PDK1Q15118 436 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 OR6B2Q6IFH4 312 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 KLC3Q6P597 504 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 MOCOSQ96EN8 888 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 CDRT15Q96T59 188 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 XPNPEP3Q9NQH7 507 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 PSAT1Q9Y617 370 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 MYO18AQ92614 2054 aaKnown RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 MED7O43513 233 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 DENRO43583 198 aaKnown RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 GLRA3O75311 464 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 RGS20O76081 388 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 DESP17661 470 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 SESN2P58004 480 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 ABCE1P61221 599 aaKnown RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 KLF10Q13118 480 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 FLOT2Q14254 428 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 SLC9B1Q4ZJI4 515 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 ACBD5Q5T8D3 534 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 ZNF534Q76KX8 674 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 AMIGO2Q86SJ2 522 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 FRMD8Q9BZ67 464 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 DNAJC28Q9NX36 388 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 SSX2IPQ9Y2D8 614 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 HEMK1Q9Y5R4 338 aaPredicted RBP16.89■□□□□ 0.29
EFEMP1-202ENST00000394555 A0A1B0GTW7 788 aa16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 TNFAIP8O95379 198 aa16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 HNRNPCP07910 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 ASNSP08243 561 aa16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 STN1Q9H668 368 aaKnown RBP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 DOCK5Q9H7D0 1870 aa16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 NELFEP18615 380 aaKnown RBP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 TCN1P20061 433 aaPredicted RBP16.88■□□□□ 0.29
EFEMP1-202ENST00000394555 GPD1P21695 349 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms