RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 A0A087WXM4 84 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 FAM170AA1A519 330 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 LSM1O15116 133 aaKnown RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 ZC3H11AO75152 810 aaKnown RBP eCLIP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 NSFP46459 744 aaKnown RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 SLC5A3P53794 718 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 GCNT1Q02742 428 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 SPOCD1Q6ZMY3 1216 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 CDHR3Q6ZTQ4 885 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 ZNF354CQ86Y25 554 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 CHURC1Q8WUH1 139 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 TFB1MQ8WVM0 346 aaKnown RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 THAP11Q96EK4 314 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 IKZF4Q9H2S9 585 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 PCDHA1Q9Y5I3 950 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 SFI1A8K8P3 1242 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 K7EPI3 171 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 SGK1O00141 431 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 CD58P19256 250 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 MRPS5P82675 430 aaKnown RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 CDKL1Q00532 357 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 PRR16Q569H4 304 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 TCHHL1Q5QJ38 904 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 ODR4Q5SWX8 454 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 MFSD4BQ5TF39 518 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 PCYOX1LQ8NBM8 494 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 RMND5BQ96G75 393 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-202ENST00000394180 CCDC138Q96M89 665 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 TMEM9Q9P0T7 183 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 FEM1BQ9UK73 627 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 RNF11Q9Y3C5 154 aa22.41■■□□□ 1.18
CLDND1-202ENST00000394180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.4■■□□□ 1.18
CLDND1-202ENST00000394180 TRIM49D1C9J1S8 452 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 MCF2LO15068 1137 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 SLC22A2O15244 555 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 EIF2B2P49770 351 aaKnown RBP22.4■■□□□ 1.18
CLDND1-202ENST00000394180 RGS21Q2M5E4 152 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 CES4AQ5XG92 561 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 MIER3Q7Z3K6 550 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 SAMD3Q8N6K7 520 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 TBC1D15Q8TC07 691 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 PSD2Q9BQI7 771 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 PCDHB2Q9Y5E7 798 aa22.4■■□□□ 1.18
CLDND1-202ENST00000394180 hCG_1818297A0A087WSY0 165 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 TRIM64A6NGJ6 449 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 TRPA1O75762 1119 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 ZBTB11O95625 1053 aaPredicted RBP22.39■■□□□ 1.18
CLDND1-202ENST00000394180 WEE2P0C1S8 567 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 COX4I1P13073 169 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 ZNF26P17031 533 aaPredicted RBP22.39■■□□□ 1.18
CLDND1-202ENST00000394180 PROZP22891 400 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 SREBF1P36956 1147 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 ARPC4P59998 168 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 TFDP3Q5H9I0 405 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 C12orf43Q96C57 262 aaKnown RBP22.39■■□□□ 1.18
CLDND1-202ENST00000394180 BCAS3Q9H6U6 928 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 SNX9Q9Y5X1 595 aa22.39■■□□□ 1.18
CLDND1-202ENST00000394180 BANF1O75531 89 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 KRT38O76015 456 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 CELF2O95319 508 aaKnown RBP22.39■■□□□ 1.17
CLDND1-202ENST00000394180 NFKBIAP25963 317 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 GK3PQ14409 553 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 ANKDD1AQ495B1 522 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 PDPK2PQ6A1A2 396 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 PAOXQ6QHF9 649 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TIFABQ6ZNK6 161 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TMEM102Q8N9M5 508 aaPredicted RBP22.39■■□□□ 1.17
CLDND1-202ENST00000394180 USP6NLQ92738 828 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TMIGD2Q96BF3 282 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TPK1Q9H3S4 243 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TMEM8AQ9HCN3 771 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 ERGIC3Q9Y282 383 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 TEX264Q9Y6I9 313 aa22.39■■□□□ 1.17
CLDND1-202ENST00000394180 C19orf81C9J6K1 198 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 PSMD12O00232 456 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-202ENST00000394180 RFPL1O75677 317 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 CYP3A4P08684 503 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 GRK2P25098 689 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 CCT8P50990 548 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 BBS9Q3SYG4 887 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 ITPRIPL1Q6GPH6 555 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 PHF13Q86YI8 300 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-202ENST00000394180 HIPK4Q8NE63 616 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 WNK4Q96J92 1243 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 ACCSQ96QU6 501 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 MECRQ9BV79 373 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 DRC3Q9H069 523 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 SEPT3Q9UH03 358 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 DOLKQ9UPQ8 538 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 TTLL3Q9Y4R7 772 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 ARHGEF37A1IGU5 675 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 GPR25O00155 361 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 KPNA4O00629 521 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-202ENST00000394180 KITP10721 976 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 MAMLD1Q13495 774 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 LDLRAD1Q5T700 205 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 ANKRD22Q5VYY1 191 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 NANOGP8Q6NSW7 305 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 C16orf87Q6PH81 154 aa22.38■■□□□ 1.17
CLDND1-202ENST00000394180 MFSD7Q6UXD7 560 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms