RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FAM71AQ8IYT1 594 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 UCMAQ8WVF2 138 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 RNF34Q969K3 372 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 TMA16Q96EY4 203 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 PIWIL1Q96J94 861 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 SPACA7Q96KW9 195 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 ACOX2Q99424 681 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 STIM2Q9P246 746 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 CLEC4EQ9ULY5 219 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
SMARCE1-203ENST00000377808 F8VZ95 297 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 MAP3K13O43283 966 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 ACSL4O60488 711 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 GFPT2O94808 682 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 RHOBTB1O94844 696 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 ERBB2P04626 1255 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 CYP11B1P15538 503 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 HOXD9P28356 352 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 SGSHP51688 502 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 ZNF445P59923 1031 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 YWHAZP63104 245 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 UBXN1Q04323 297 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 TAF5Q15542 800 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 ANO6Q4KMQ2 910 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 SYPL2Q5VXT5 272 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 RASSF3Q86WH2 238 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 FAM217AQ8IXS0 508 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 TMEM35BQ8NCS4 154 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 RLN3Q8WXF3 142 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 FCRL2Q96LA5 508 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 SPAG5Q96R06 1193 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 DDX50Q9BQ39 737 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 STK33Q9BYT3 514 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 LHX5Q9H2C1 402 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 ARRDC1-AS1Q9H2J1 176 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 NLRC4Q9NPP4 1024 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 RIF1Q5UIP0 2472 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-203ENST00000377808 WASH3PC4AMC7 463 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 HSF2BPO75031 334 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 TRUB2O95900 331 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 IGLV3-27P01718 113 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC6A4P31645 630 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 ID4P47928 161 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CDK17Q00537 523 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CREB5Q02930 508 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 RING1Q06587 406 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 NME3Q13232 169 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 STARD3Q14849 445 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SYCP1Q15431 976 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 PLK5Q496M5 336 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 PTPN20Q4JDL3 420 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 ZC3H12AQ5D1E8 599 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 EFHC1Q5JVL4 640 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 KIAA1211LQ6NV74 962 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 KIAA1324Q6UXG2 1013 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 C11orf74Q86VG3 221 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CHSY1Q86X52 802 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 MFN1Q8IWA4 741 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CCDC117Q8IWD4 279 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CARNMT1Q8N4J0 409 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SORCS1Q8WY21 1168 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 NAA15Q9BXJ9 866 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 NUCKS1Q9H1E3 243 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 GANQ9H2C0 597 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SEMA4GQ9NTN9 838 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 ABCB8Q9NUT2 735 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 DDIT4Q9NX09 232 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 STOML2Q9UJZ1 356 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 FBXO10Q9UK96 956 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC27A6Q9Y2P4 619 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 STON1Q9Y6Q2 735 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
SMARCE1-203ENST00000377808 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 IRAK2O43187 625 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 SYNCRIPO60506 623 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 EPN2O95208 641 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 MMEP08473 750 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 GABRG2P18507 467 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 BCKDHBP21953 392 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 IL12RB1P42701 662 aa12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 DHPSP49366 369 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 PITX1P78337 314 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC6A3Q01959 620 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms