RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DDX50Q9BQ39 737 aaKnown RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 TLR6Q9Y2C9 796 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 NUP205Q92621 2012 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 TYW5A2RUC4 315 aaKnown RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 GFRA2O00451 464 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 IRAK2O43187 625 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 FOXD2O60548 495 aaPredicted RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 EPN2O95208 641 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 FYNP06241 537 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 GLI1P08151 1106 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 HOXD9P28356 352 aaPredicted RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 GBP1P32455 592 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 ID4P47928 161 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 YWHAZP63104 245 aaKnown RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 EIF4HQ15056 248 aaKnown RBP17.5■□□□□ 0.39
HMGN4-201ENST00000377575 PLK5Q496M5 336 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 DPY19L2P1Q6NXN4 242 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 TAC4Q86UU9 113 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 PGBD3Q8N328 593 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 CPXM1Q96SM3 734 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 GABRG3Q99928 467 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 VPS16Q9H269 839 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 SYNCQ9H7C4 482 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 PLCB1Q9NQ66 1216 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 FANCLQ9NW38 375 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 ASNSD1Q9NWL6 643 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 HCN2Q9UL51 889 aa17.5■□□□□ 0.39
HMGN4-201ENST00000377575 CKAP5Q14008 2032 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 PRR5-ARHGAP8B1AHC4 643 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 ACSL4O60488 711 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 TSPAN3O60637 253 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 HSF2BPO75031 334 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 APOEP02649 317 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 ARHGAP8P85298 464 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 CSRP2Q16527 193 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 GEN1Q17RS7 908 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 EFHC1Q5JVL4 640 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 ZNF557Q8N988 423 aaPredicted RBP17.49■□□□□ 0.39
HMGN4-201ENST00000377575 TMA16Q96EY4 203 aaKnown RBP17.49■□□□□ 0.39
HMGN4-201ENST00000377575 PIWIL1Q96J94 861 aaKnown RBP17.49■□□□□ 0.39
HMGN4-201ENST00000377575 FCRL2Q96LA5 508 aaPredicted RBP17.49■□□□□ 0.39
HMGN4-201ENST00000377575 NAA15Q9BXJ9 866 aaKnown RBP17.49■□□□□ 0.39
HMGN4-201ENST00000377575 STK33Q9BYT3 514 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 PARD6AQ9NPB6 346 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 SEMA4GQ9NTN9 838 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 DAAM1Q9Y4D1 1078 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 PCDHGA5Q9Y5G8 931 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 CEP192Q8TEP8 1941 aa17.49■□□□□ 0.39
HMGN4-201ENST00000377575 CEP250Q9BV73 2442 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 F8VZ95 297 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 DCLK1O15075 740 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 CYP11B1P15538 503 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 SDHBP21912 280 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 TGM1P22735 817 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 WASP42768 502 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 ARID5AQ03989 594 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 STARD3Q14849 445 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 FAM133BQ5BKY9 247 aaKnown RBP17.48■□□□□ 0.39
HMGN4-201ENST00000377575 MPP7Q5T2T1 576 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 SYPL2Q5VXT5 272 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 WDTC1Q8N5D0 677 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 HJURPQ8NCD3 748 aaPredicted RBP17.48■□□□□ 0.39
HMGN4-201ENST00000377575 TMEM35BQ8NCS4 154 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 OLIG1Q8TAK6 271 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 ADAM32Q8TC27 787 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 WFIKKN2Q8TEU8 576 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 SLC39A13Q96H72 371 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 ACOX2Q99424 681 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
HMGN4-201ENST00000377575 DUSP15Q9H1R2 295 aaPredicted RBP17.48■□□□□ 0.39
HMGN4-201ENST00000377575 FAM204AQ9H8W3 233 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 CACNA2D2Q9NY47 1150 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 TJP2Q9UDY2 1190 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 MUC22E2RYF6 1773 aaPredicted RBP17.48■□□□□ 0.39
HMGN4-201ENST00000377575 DCHS1Q96JQ0 3298 aa17.48■□□□□ 0.39
HMGN4-201ENST00000377575 TNRC6BQ9UPQ9 1833 aaKnown RBP17.47■□□□□ 0.39
HMGN4-201ENST00000377575 ABCA7Q8IZY2 2146 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 A0A1W2PQF6 199 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 TIMM44O43615 452 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 TRUB2O95900 331 aaKnown RBP17.47■□□□□ 0.39
HMGN4-201ENST00000377575 MOCS2O96007 188 aaPredicted RBP17.47■□□□□ 0.39
HMGN4-201ENST00000377575 GABRG2P18507 467 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
HMGN4-201ENST00000377575 CDK17Q00537 523 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 TYRO3Q06418 890 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 DCAF6Q58WW2 860 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 PIK3R6Q5UE93 754 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 PMS2CLQ68D20 193 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 RFWD3Q6PCD5 774 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 OLFML1Q6UWY5 402 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 PRR23CQ6ZRP0 262 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 FAM183BPQ6ZVS7 135 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 ZDHHC17Q8IUH5 632 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms