RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ARL2P36404 184 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ZNF143P52747 638 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 OCRLQ01968 901 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TMEM259Q4ZIN3 620 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ASRGL1Q7L266 308 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CTU1Q7Z7A3 348 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ANKLE1Q8NAG6 615 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 OR6P1Q8NGX9 317 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PCDH19Q8TAB3 1148 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DENND1AQ8TEH3 1009 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HDAC11Q96DB2 347 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DNAI2Q9GZS0 605 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PCDH18Q9HCL0 1135 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 BARX2Q9UMQ3 279 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SHANK3Q9BYB0 1731 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SDR42E2A6NKP2 422 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DYNC1LI2O43237 492 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ARIH2O95376 493 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 JCHAINP01591 159 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CYP2C8P10632 490 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SP100P23497 879 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 EPHA3P29320 983 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ADIGQ0VDE8 80 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CCDC142Q17RM4 750 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAP1SQ66K74 1059 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TLDC1Q6P9B6 456 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DEFB106AQ8N104 65 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HASPINQ8TF76 798 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CHST12Q9NRB3 414 aa14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PRMT7Q9NVM4 692 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CORO1CQ9ULV4 474 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ADM5C9JUS6 153 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 EEF2KO00418 725 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MSCO60682 206 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 NCAM1P13591 858 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ACADSP16219 412 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ASPAP45381 313 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TPI1P60174 286 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FOXD4Q12950 439 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAP7Q14244 749 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SPDYAQ5MJ70 313 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KRT80Q6KB66 452 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TRIML2Q8N7C3 387 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FAM156AQ8NDB6 213 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PIWIL2Q8TC59 973 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 NRDE2Q9H7Z3 1164 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PLLPQ9Y342 182 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 GOLGA8CPA6NN73 597 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PPEF2O14830 753 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 IRF6O14896 467 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HNRNPCL1O60812 293 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 POLBP06746 335 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 POU6F1Q14863 301 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 NOMO1Q15155 1222 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 BEST2Q8NFU1 509 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HTR3CQ8WXA8 447 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SEMA6AQ9H2E6 1030 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 IRAK4Q9NWZ3 460 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ERAP1Q9NZ08 941 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAFO75444 373 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ARF4P18085 180 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TNFAIP2Q03169 654 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PTP4A2Q12974 167 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PDE1CQ14123 709 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FLOT2Q14254 428 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CATSPERGQ6ZRH7 1159 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FAXDC2Q96IV6 333 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DPEP3Q9H4B8 488 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PPCSQ9HAB8 311 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 XPNPEP3Q9NQH7 507 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DDIT4Q9NX09 232 aa14.8□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HBP1O60381 514 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SPAG6O75602 509 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HOXC6P09630 235 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 NAGLUP54802 743 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 LCA5Q86VQ0 697 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SNX32Q86XE0 403 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ARFGAP1Q8N6T3 406 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PRDM12Q9H4Q4 367 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CPSF3Q9UKF6 684 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 AURKCQ9UQB9 309 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ARAP2Q8WZ64 1704 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TBC1D12O60347 775 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TCEA3O75764 348 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CSPG5O95196 566 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ARPP19P56211 112 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PLIN5Q00G26 463 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SLC25A11Q02978 314 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 NRF1Q16656 503 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CYP2R1Q6VVX0 501 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DIS3LQ8TF46 1054 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CDRT15Q96T59 188 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 THAP1Q9NVV9 213 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 A0A096LPK6 155 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms