RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PCYOX1Q9UHG3 505 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 NUDT5Q9UKK9 219 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 AP4E1Q9UPM8 1137 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 NEU2Q9Y3R4 380 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 NR2E3Q9Y5X4 410 aa9.86□□□□□ -0.83
VTA1-201ENST00000367621 SYNJ2BP-COX16A0A087WUM0 186 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ZSCAN5CA6NGD5 496 aaPredicted RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 KCNU1A8MYU2 1149 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM72CH0Y354 149 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 IRAK2O43187 625 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 MSI1O43347 362 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 TBX18O95935 607 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 F9P00740 461 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 RB1P06400 928 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 CA3P07451 260 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SPATA31D3P0C874 917 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 RARGP13631 454 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 H2AFXP16104 143 aaPredicted RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 NDUFV2P19404 249 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 CHRNA3P32297 505 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 IRS1P35568 1242 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 KCNJ1P48048 391 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ERVK-21P61565 698 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 VSNL1P62760 191 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 UBE3AQ05086 875 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 TWF1Q12792 350 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SMC1AQ14683 1233 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 TRADDQ15628 312 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 CCNG2Q16589 344 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ANKRD20A8PQ5CZ79 823 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM72AQ5TYM5 149 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 KAZNQ674X7 775 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SLC9A4Q6AI14 798 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM72DQ6L9T8 149 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SPATA31D4Q6ZUB0 917 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 TMC7Q7Z402 723 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 TMEM150AQ86TG1 271 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM72BQ86X60 149 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ARHGAP18Q8N392 663 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ZNF276Q8N554 614 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 PLD5Q8N7P1 536 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 MAIP1Q8WWC4 291 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SEC14L1Q92503 715 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 MAGOHBQ96A72 148 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 SLC39A13Q96H72 371 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 CSPG4P5Q96PW8 444 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 RNF157Q96PX1 679 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM118BQ9BPY3 351 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 TCF25Q9BQ70 676 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 HINFPQ9BQA5 517 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ZNF670Q9BS34 389 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 TRIM62Q9BVG3 475 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 DHX35Q9H5Z1 703 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM204AQ9H8W3 233 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 GDF3Q9NR23 364 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ETNK2Q9NVF9 386 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 ARHGEF38Q9NXL2 777 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.85□□□□□ -0.83
VTA1-201ENST00000367621 CWC15Q9P013 229 aaKnown RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 COX16Q9P0S2 106 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SAE1Q9UBE0 346 aaPredicted RBP9.85□□□□□ -0.83
VTA1-201ENST00000367621 SFMBT1Q9UHJ3 866 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 AMACRQ9UHK6 382 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 MTUS1Q9ULD2 1270 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SSX2IPQ9Y2D8 614 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 RWDD3Q9Y3V2 267 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 PCDHA11Q9Y5I1 949 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 SNX10Q9Y5X0 201 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 PTPRDP23468 1912 aa9.85□□□□□ -0.83
VTA1-201ENST00000367621 CHD9Q3L8U1 2897 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 ZNF840PA6NDX5 716 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 TTI1O43156 1089 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 LIASO43766 372 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 CST8O60676 142 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 TJP3O95049 919 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 MYBL2P10244 700 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 PECAM1P16284 738 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 CETN2P41208 172 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 FNTAP49354 379 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 AIF1P55008 147 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 DPYSQ14117 519 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 OASLQ15646 514 aaKnown RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 WDR93Q6P2C0 686 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 DRICH1Q6PGQ1 229 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 NPNTQ6UXI9 565 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 SLC35B2Q8TB61 432 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 OVCA2Q8WZ82 227 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 SLCO2A1Q92959 643 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 NKD2Q969F2 451 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 TRMT2BQ96GJ1 504 aaKnown RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 FCRL2Q96LA5 508 aaPredicted RBP9.84□□□□□ -0.83
VTA1-201ENST00000367621 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 LRRC3Q9BY71 257 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
VTA1-201ENST00000367621 CCSER2Q9H7U1 834 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms