RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 SKA1Q96BD8 255 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 RPN2P04844 631 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 RAG1P15918 1043 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 LAMTOR4Q0VGL1 99 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 BST2Q10589 180 aaKnown RBP13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 GRIK3Q13003 919 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 TSNQ15631 228 aaKnown RBP13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXO47Q5MNV8 452 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 CENPXA8MT69 81 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 CALB2P22676 271 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF618Q5T7W0 954 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 VPS33AQ96AX1 596 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM79Q9BSE2 394 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 E9PCH4 1651 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 CCDC154A6NI56 674 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 O00370 1275 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 UMPSP11172 480 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 MYL12AP19105 171 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 CAP2P40123 477 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 SEPHS2Q99611 448 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 KANSL3Q9P2N6 904 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 MED14O60244 1454 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
LDLRAD4-201ENST00000359446 RAMP2O60895 175 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZCCHC18P0CG32 403 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 RENBPP51606 427 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 SKP1P63208 163 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM98BQ52LJ0 330 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM26Q6ZUK4 368 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FLCNQ8NFG4 579 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 RXFP2Q8WXD0 754 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PAFAH2Q99487 392 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM228BP0C875 321 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 CLK2P49760 499 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 IRX1P78414 480 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ITIH4Q14624 930 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PTGISQ16647 500 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 MAGEA13PA6NCF6 341 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TM9SF1O15321 606 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TSPAN3O60637 253 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 CSDE1O75534 798 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KRT6AP02538 564 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KRT6BP04259 564 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PTPN3P26045 913 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 EPHX2P34913 555 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KRT6CP48668 564 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 CSGALNACT1Q8TDX6 532 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ITGA11Q9UKX5 1188 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 COQ6Q9Y2Z9 468 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 LRRC14BA6NHZ5 514 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TBC1D12O60347 775 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 MTA2O94776 668 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 VPS72Q15906 364 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 SETMARQ53H47 684 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 OVOS1Q6IE37 1185 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 S100A13Q99584 98 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PTPRHQ9HD43 1115 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PIK3R1P27986 724 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 HPCAL1P37235 193 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TBX4P57082 545 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TAF13Q15543 124 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 NOD2Q9HC29 1040 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM191CA6NGB0 347 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 AGRPO00253 132 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ATG7O95352 703 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 RAD23AP54725 363 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM171A1Q5VUB5 890 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXO33Q7Z6M2 555 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLHL31Q9H511 634 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms