RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 C11orf49Q9H6J7 331 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 MTMR11A4FU01 709 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 MAGEA4P43358 317 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 PPP6R3Q5H9R7 873 aaPredicted RBP17.81■□□□□ 0.44
VPS13B-201ENST00000355155 PPP1R21Q6ZMI0 780 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 RIBC1Q8N443 379 aaPredicted RBP17.81■□□□□ 0.44
VPS13B-201ENST00000355155 DPF3Q92784 378 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 SLC39A13Q96H72 371 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 RBM15Q96T37 977 aaKnown RBP eCLIP17.81■□□□□ 0.44
VPS13B-201ENST00000355155 TTPALQ9BTX7 342 aa17.81■□□□□ 0.44
VPS13B-201ENST00000355155 KCNU1A8MYU2 1149 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 H7C0C1 242 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 AGTP01019 485 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 AMPD1P23109 780 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 ATP5OP48047 213 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 GBE1Q04446 702 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 STAT4Q14765 748 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 CENPUQ71F23 418 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 CMTR2Q8IYT2 770 aaKnown RBP17.8■□□□□ 0.44
VPS13B-201ENST00000355155 OR2W6PQ8NHA6 318 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 MAGEB5Q9BZ81 275 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 DDIT4Q9NX09 232 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 MAFFQ9ULX9 164 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 WASH4PA8MWX3 477 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 TIMP1P01033 207 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 RBL1P28749 1068 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 MAGEA3P43357 314 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 CCL23P55773 120 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 MTA1Q13330 715 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 PDZD4Q76G19 769 aaPredicted RBP17.8■□□□□ 0.44
VPS13B-201ENST00000355155 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 C1orf74Q96LT6 269 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
VPS13B-201ENST00000355155 ETNK2Q9NVF9 386 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 EEF2KO00418 725 aaKnown RBP17.8■□□□□ 0.44
VPS13B-201ENST00000355155 OR4Q2P0C623 313 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 PDK1Q15118 436 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
VPS13B-201ENST00000355155 OVCA2Q8WZ82 227 aa17.8■□□□□ 0.44
VPS13B-201ENST00000355155 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 HSPA8P11142 646 aaKnown RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 VPS41P49754 854 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 ARL4CP56559 192 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 SEMA5AQ13591 1074 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 RTP2Q5QGT7 225 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 UBAP2Q5T6F2 1119 aaKnown RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 KCNT2Q6UVM3 1135 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 TFB1MQ8WVM0 346 aaKnown RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 MFSD11O43934 449 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 AMHP03971 560 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 NME3Q13232 169 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 ANKRD22Q5VYY1 191 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 BTBD8Q5XKL5 378 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 RSPO2Q6UXX9 243 aaPredicted RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 DIS3LQ8TF46 1054 aaKnown RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 IGSF21Q96ID5 467 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 SERPINB11Q96P15 392 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 STMN4Q9H169 189 aaPredicted RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 NMUR1Q9HB89 426 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
VPS13B-201ENST00000355155 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 TLR6Q9Y2C9 796 aa17.79■□□□□ 0.44
VPS13B-201ENST00000355155 KCNN4O15554 427 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 TMEM63AO94886 807 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 FDFT1P37268 417 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 ATN1P54259 1190 aaPredicted RBP17.78■□□□□ 0.44
VPS13B-201ENST00000355155 CDK16Q00536 496 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 GALNT2Q10471 571 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 ZC3H18Q86VM9 953 aaKnown RBP17.78■□□□□ 0.44
VPS13B-201ENST00000355155 FATE1Q969F0 183 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 HDAC11Q96DB2 347 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 EPAS1Q99814 870 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 KLC2Q9H0B6 622 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 TMEM39AQ9NV64 488 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 ABI2Q9NYB9 513 aaPredicted RBP17.78■□□□□ 0.44
VPS13B-201ENST00000355155 PPP1R12AO14974 1030 aaPredicted RBP17.78■□□□□ 0.44
VPS13B-201ENST00000355155 IFNB1P01574 187 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 VAV1P15498 845 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 PPIDQ08752 370 aaKnown RBP17.78■□□□□ 0.44
VPS13B-201ENST00000355155 HIF1AQ16665 826 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 USP41Q3LFD5 358 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 KRT71Q3SY84 523 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 LRRC39Q96DD0 335 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 PPP1R12CQ9BZL4 782 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 TKTL2Q9H0I9 626 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 LRRC4CQ9HCJ2 640 aa17.78■□□□□ 0.44
VPS13B-201ENST00000355155 A0A087WUV0 522 aaPredicted RBP17.77■□□□□ 0.44
VPS13B-201ENST00000355155 A0A0A0MRY4 1105 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 FAM72CH0Y354 149 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 GSTA2P09210 222 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 NR1D1P20393 614 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms