RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PDK1Q15118 436 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 CDHR3Q6ZTQ4 885 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 CRLF3Q8IUI8 442 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 ATP2A3Q93084 1043 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 HNRNPABQ99729 332 aaKnown RBP15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 DPEP3Q9H4B8 488 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 SORCS3Q9UPU3 1222 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 LRRC42Q9Y546 428 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 RAD54BQ9Y620 910 aa15.96■□□□□ 0.15
TNFSF13-202ENST00000349228 CITO14578 2027 aa15.96■□□□□ 0.14
TNFSF13-202ENST00000349228 SMIM28A0A1B0GU29 152 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 HUS1O60921 280 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 CCDC130P13994 396 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 TFE3P19532 575 aaPredicted RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 NOS2P35228 1153 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 GCKP35557 465 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 AIF1P55008 147 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 BST1Q10588 318 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 C4orf50Q6ZRC1 276 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 TOP6BLQ8N6T0 577 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 ARMC2Q8NEN0 867 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 KCTD13Q8WZ19 329 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 MAML3Q96JK9 1138 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 TINF2Q9BSI4 451 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 CADM1Q9BY67 442 aaKnown RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 STAP1Q9ULZ2 295 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 FCHO1O14526 889 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 SNNO75324 88 aaPredicted RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 PDGFRBP09619 1106 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 IBSPP21815 317 aaPredicted RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 AMPD1P23109 780 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 GTF2A2P52657 109 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 GRB14Q14449 540 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 PDZD4Q76G19 769 aaPredicted RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 CCDC185Q8N715 623 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 COLGALT1Q8NBJ5 622 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 SMC1BQ8NDV3 1235 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 STKLD1Q8NE28 680 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 CLEC4CQ8WTT0 213 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 NT5C3BQ969T7 300 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 SLC9A7Q96T83 725 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 DUSP16Q9BY84 665 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 SLC13A1Q9BZW2 595 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 FAM96AQ9H5X1 160 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 STN1Q9H668 368 aaKnown RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 DENND2DQ9H6A0 471 aaPredicted RBP15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 THAP1Q9NVV9 213 aa15.95■□□□□ 0.14
TNFSF13-202ENST00000349228 LIN7AO14910 233 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 MAP3K6O95382 1288 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 GOT1P17174 413 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 PGAM1P18669 254 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 EPHX2P34913 555 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 SULT1E1P49888 294 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 WASHC5Q12768 1159 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 STX3Q13277 289 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 PAFAH1B3Q15102 231 aaKnown RBP15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 CHI3L2Q15782 390 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 INSCQ1MX18 579 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 TEX44Q53QW1 395 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 TRMT10BQ6PF06 316 aaKnown RBP15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 BNIPLQ7Z465 357 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 DEFB106AQ8N104 65 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 TEX9Q8N6V9 391 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 SLC2A14Q8TDB8 520 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 MCUR1Q96AQ8 359 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 FAM49AQ9H0Q0 323 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 NXF3Q9H4D5 531 aaKnown RBP15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 ARHGEF4Q9NR80 690 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 DCDC2Q9UHG0 476 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 HMX2A2RU54 273 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 GLRA3O75311 464 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 SMIM10L2AP0DMW4 78 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 SMIM10L2BP0DMW5 78 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 RARBP10826 455 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 CYP2C9P11712 490 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 MROH9Q5TGP6 573 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 GPR142Q7Z601 462 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 ADGRF2Q8IZF7 708 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 MPP5Q8N3R9 675 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 MIPEPQ99797 713 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 CXCL16Q9H2A7 254 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 IGSF9Q9P2J2 1179 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 STOML1Q9UBI4 398 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 GINS2Q9Y248 185 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 NUMBLQ9Y6R0 609 aa15.94■□□□□ 0.14
TNFSF13-202ENST00000349228 SBF1O95248 1867 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 FAM237BA0A1B0GVD1 139 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 F2P00734 622 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 LMO2P25791 158 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 ATXN1P54253 815 aaKnown RBP15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 NIPAL4Q0D2K0 466 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 BMPR2Q13873 1038 aa15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 FRG1Q14331 258 aaKnown RBP15.93■□□□□ 0.14
TNFSF13-202ENST00000349228 GLRA4Q5JXX5 417 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms