RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RXFP2Q8WXD0 754 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 ZNF669Q96BR6 464 aaPredicted RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 TUBGCP5Q96RT8 1024 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 SARS2Q9NP81 518 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 ROBO3Q96MS0 1386 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 MAP3K13O43283 966 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 TSC22D2O75157 780 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 MRPS22P82650 360 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 ITGA7Q13683 1181 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 SCAIQ8N9R8 606 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 DQX1Q8TE96 717 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 PAWRQ96IZ0 340 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 CEP44Q9C0F1 390 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 TJP2Q9UDY2 1190 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 COQ6Q9Y2Z9 468 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 PAEPP09466 180 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 PDK2Q15119 407 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 IRF2BP2Q7Z5L9 587 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 CCDC60Q8IWA6 550 aaPredicted RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 BRSK2Q8IWQ3 736 aa15.9■□□□□ 0.14
SRPK1-201ENST00000346162 LNX1Q8TBB1 728 aaPredicted RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 DIS3LQ8TF46 1054 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 ADARB2Q9NS39 739 aaKnown RBP15.9■□□□□ 0.14
SRPK1-201ENST00000346162 NID2Q14112 1375 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 ATP5BP06576 529 aaKnown RBP15.89■□□□□ 0.13
SRPK1-201ENST00000346162 VCLP18206 1134 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 TTKP33981 857 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 NPY5RQ15761 445 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 TFB1MQ8WVM0 346 aaKnown RBP15.89■□□□□ 0.13
SRPK1-201ENST00000346162 CPB2Q96IY4 423 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 HSD3B7Q9H2F3 369 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 DNAJC18Q9H819 358 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 STMN3Q9NZ72 180 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 PPP2R3BQ9Y5P8 575 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 M0QYT0 321 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 PSMD3O43242 534 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 INSRRP14616 1297 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 RPA3P35244 121 aaPredicted RBP15.89■□□□□ 0.13
SRPK1-201ENST00000346162 PTGER2P43116 358 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 RMDN1Q96DB5 314 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 PABPC5Q96DU9 382 aaKnown RBP15.89■□□□□ 0.13
SRPK1-201ENST00000346162 VIRMAQ69YN4 1812 aaKnown RBP15.89■□□□□ 0.13
SRPK1-201ENST00000346162 MTSS1O43312 755 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 BMT2Q1RMZ1 405 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 LPCAT4Q643R3 524 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 IL31RAQ8NI17 732 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 ZNF398Q8TD17 642 aa15.89■□□□□ 0.13
SRPK1-201ENST00000346162 C2CD2LO14523 706 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ANGPT2O15123 496 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 SLC25A3Q00325 362 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 TMTC4Q5T4D3 741 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ZFP1Q6P2D0 407 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 OR9Q1Q8NGQ5 310 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ZNF384Q8TF68 577 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 UBE2OQ9C0C9 1292 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 DDIT4Q9NX09 232 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ACTL7BQ9Y614 415 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 H3BRB1 525 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ADRB2P07550 413 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 PPATQ06203 517 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 PDK4Q16654 411 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 SHROOM1Q2M3G4 852 aaPredicted RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 MFSD7Q6UXD7 560 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 USP13Q92995 863 aaPredicted RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 FGFBP2Q9BYJ0 223 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 TUT1Q9H6E5 874 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 PCDH9Q9HC56 1237 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 AP4B1Q9Y6B7 739 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 LTN1O94822 1766 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 E2F8A0AVK6 867 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 CLOCKO15516 846 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 PDCD4Q53EL6 469 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 PACS1Q6VY07 963 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 TMEM161BQ8NDZ6 487 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 CHID1Q9BWS9 393 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 TASP1Q9H6P5 420 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 LMCD1Q9NZU5 365 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 NKX1-2Q9UD57 310 aaPredicted RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 BARX2Q9UMQ3 279 aaPredicted RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 LRRC42Q9Y546 428 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 SAC3D1A6NKF1 404 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 E5RI56 91 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 E9PBE3 544 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 TFE3P19532 575 aaPredicted RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ACO1P21399 889 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 CDC26Q8NHZ8 85 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 FNIP1Q8TF40 1166 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 EML4Q9HC35 981 aaKnown RBP15.88■□□□□ 0.13
SRPK1-201ENST00000346162 CDYLQ9Y232 598 aa15.88■□□□□ 0.13
SRPK1-201ENST00000346162 ACKR2O00590 384 aa15.87■□□□□ 0.13
SRPK1-201ENST00000346162 PTPRAP18433 802 aa15.87■□□□□ 0.13
SRPK1-201ENST00000346162 HIRAP54198 1017 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms