RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 NEK11Q8NG66 645 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 RPLP0P6Q8NHW5 317 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 SLC20A1Q8WUM9 679 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 ARHGEF4Q9NR80 690 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 WDR35Q9P2L0 1181 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 IGLV3-25P01717 112 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 CISD3P0C7P0 127 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 CHKAP35790 457 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 GRIA2P42262 883 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 HARS2P49590 506 aaKnown RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 PITX1P78337 314 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 RING1Q06587 406 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 EIF4EBP2Q13542 120 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 PLA2G2CQ5R387 149 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 TAC4Q86UU9 113 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 KBTBD6Q86V97 674 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 C12orf50Q8NA57 414 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 TMEM35BQ8NCS4 154 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 SLC39A13Q96H72 371 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 FCRL2Q96LA5 508 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 PCMTD1Q96MG8 357 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
VAPA-201ENST00000340541 CNTNAP3BQ96NU0 1288 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 NOX5Q96PH1 765 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 SLC2A13Q96QE2 648 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 SPAG5Q96R06 1193 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 TRIM62Q9BVG3 475 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 CNTNAP3Q9BZ76 1288 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 POPDC2Q9HBU9 364 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 ASNSD1Q9NWL6 643 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 DEC1Q9P2X7 70 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 FBXO10Q9UK96 956 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 HCN2Q9UL51 889 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 SPAG17Q6Q759 2223 aa16.03■□□□□ 0.16
VAPA-201ENST00000340541 TM4SF5O14894 197 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 GDF9O60383 454 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 RHOBTB1O94844 696 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 APBB3O95704 486 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 LSM8O95777 96 aaKnown RBP16.02■□□□□ 0.16
VAPA-201ENST00000340541 LATS1O95835 1130 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 APODP05090 189 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 GLI1P08151 1106 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 STAT1P42224 750 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
VAPA-201ENST00000340541 GABRB2P47870 512 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 PXNP49023 591 aaPredicted RBP16.02■□□□□ 0.16
VAPA-201ENST00000340541 SEC13P55735 322 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 TBX4P57082 545 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 NOMO3P69849 1222 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 FMO1Q01740 532 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 CDR2Q01850 454 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 NNTQ13423 1086 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
VAPA-201ENST00000340541 EFHC1Q5JVL4 640 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 IL31Q6EBC2 164 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 SLC26A9Q7LBE3 791 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 C11orf74Q86VG3 221 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 ZNF677Q86XU0 584 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 TERB1Q8NA31 727 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 BHMTQ93088 406 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 SERPINB11Q96P15 392 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 VPS45Q9NRW7 570 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.16
VAPA-201ENST00000340541 TLR6Q9Y2C9 796 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 CEP83Q9Y592 693 aa16.02■□□□□ 0.16
VAPA-201ENST00000340541 SPTBN2O15020 2390 aa16.02■□□□□ 0.15
VAPA-201ENST00000340541 FAM170AA1A519 330 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 CAPN9O14815 690 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 IRAK2O43187 625 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 HSF2BPO75031 334 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 CAVIN2O95810 425 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 CYP1A1P04798 512 aaPredicted RBP16.01■□□□□ 0.15
VAPA-201ENST00000340541 TNFRSF4P43489 277 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 SLC6A3Q01959 620 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 DMC1Q14565 340 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 NR1I3Q14994 352 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 ELF2Q15723 593 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 PLK5Q496M5 336 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 C2orf27AQ580R0 203 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
VAPA-201ENST00000340541 ADGRF1Q5T601 910 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 EMC10Q5UCC4 262 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 NUGGCQ68CJ6 796 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 NADSYN1Q6IA69 706 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 GRAMD4Q6IC98 578 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 OR6B2Q6IFH4 312 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 DEFB106AQ8N104 65 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
VAPA-201ENST00000340541 IPO4Q8TEX9 1081 aaKnown RBP16.01■□□□□ 0.15
VAPA-201ENST00000340541 BAP1Q92560 729 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 AZIN2Q96A70 460 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms