RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ERI2A8K979 691 aaKnown RBP15.11■□□□□ 0.01
RET-201ENST00000340058 VNN1O95497 513 aa15.11■□□□□ 0.01
RET-201ENST00000340058 KRT33BQ14525 404 aa15.11■□□□□ 0.01
RET-201ENST00000340058 DDR2Q16832 855 aa15.11■□□□□ 0.01
RET-201ENST00000340058 CARNMT1Q8N4J0 409 aa15.11■□□□□ 0.01
RET-201ENST00000340058 ATP6V0D2Q8N8Y2 350 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
RET-201ENST00000340058 SMARCD1Q96GM5 515 aa15.11■□□□□ 0.01
RET-201ENST00000340058 TMEM120AQ9BXJ8 343 aa15.11■□□□□ 0.01
RET-201ENST00000340058 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
RET-201ENST00000340058 F5H5T6 163 aa15.11■□□□□ 0.01
RET-201ENST00000340058 FZD9O00144 591 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SMAPO00193 183 aa15.11■□□□□ 0.01
RET-201ENST00000340058 MMP3P08254 477 aa15.11■□□□□ 0.01
RET-201ENST00000340058 RAD51Q06609 339 aa15.11■□□□□ 0.01
RET-201ENST00000340058 NFE2Q16621 373 aaPredicted RBP15.11■□□□□ 0.01
RET-201ENST00000340058 BBS12Q6ZW61 710 aa15.11■□□□□ 0.01
RET-201ENST00000340058 HS6ST3Q8IZP7 471 aa15.11■□□□□ 0.01
RET-201ENST00000340058 RNF217Q8TC41 542 aa15.11■□□□□ 0.01
RET-201ENST00000340058 RNF208Q9H0X6 261 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SFMBT1Q9UHJ3 866 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SLC24A2Q9UI40 661 aa15.11■□□□□ 0.01
RET-201ENST00000340058 MTO1Q9Y2Z2 717 aaKnown RBP15.11■□□□□ 0.01
RET-201ENST00000340058 IPPQ9Y573 584 aa15.11■□□□□ 0.01
RET-201ENST00000340058 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ZNF142P52746 1687 aaPredicted RBP15.1■□□□□ 0.01
RET-201ENST00000340058 ASMTLO95671 621 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ERCC2P18074 760 aa15.1■□□□□ 0.01
RET-201ENST00000340058 MAXP61244 160 aa15.1■□□□□ 0.01
RET-201ENST00000340058 NSL1Q96IY1 281 aa15.1■□□□□ 0.01
RET-201ENST00000340058 CINPQ9BW66 212 aaPredicted RBP15.1■□□□□ 0.01
RET-201ENST00000340058 NIFKQ9BYG3 293 aaKnown RBP15.1■□□□□ 0.01
RET-201ENST00000340058 CD274Q9NZQ7 290 aa15.1■□□□□ 0.01
RET-201ENST00000340058 LSM7Q9UK45 103 aaKnown RBP15.1■□□□□ 0.01
RET-201ENST00000340058 AGPSO00116 658 aa15.1■□□□□ 0.01
RET-201ENST00000340058 HCRTO43612 131 aa15.1■□□□□ 0.01
RET-201ENST00000340058 RALBP11234 206 aa15.1■□□□□ 0.01
RET-201ENST00000340058 OR1E1P30953 314 aa15.1■□□□□ 0.01
RET-201ENST00000340058 MGAT5Q09328 741 aa15.1■□□□□ 0.01
RET-201ENST00000340058 TMEM63BQ5T3F8 832 aa15.1■□□□□ 0.01
RET-201ENST00000340058 MARC1Q5VT66 337 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ZNF280DQ6N043 979 aa15.1■□□□□ 0.01
RET-201ENST00000340058 GALNT4Q8N4A0 578 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ANKRD52Q8NB46 1076 aa15.1■□□□□ 0.01
RET-201ENST00000340058 DDI1Q8WTU0 396 aa15.1■□□□□ 0.01
RET-201ENST00000340058 EXOC2Q96KP1 924 aa15.1■□□□□ 0.01
RET-201ENST00000340058 MYCBPQ99417 103 aaPredicted RBP15.1■□□□□ 0.01
RET-201ENST00000340058 ETNK2Q9NVF9 386 aa15.1■□□□□ 0.01
RET-201ENST00000340058 SYNDIG1LA6NDD5 238 aa15.1■□□□□ 0.01
RET-201ENST00000340058 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
RET-201ENST00000340058 B4GALT4O60513 344 aa15.1■□□□□ 0.01
RET-201ENST00000340058 FBXO21O94952 628 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ANP32DO95626 131 aa15.1■□□□□ 0.01
RET-201ENST00000340058 DARSP14868 501 aaKnown RBP15.1■□□□□ 0.01
RET-201ENST00000340058 CPA3P15088 417 aa15.1■□□□□ 0.01
RET-201ENST00000340058 LMO2P25791 158 aa15.1■□□□□ 0.01
RET-201ENST00000340058 SERPINB3P29508 390 aa15.1■□□□□ 0.01
RET-201ENST00000340058 TBX4P57082 545 aa15.1■□□□□ 0.01
RET-201ENST00000340058 TRIP10Q15642 601 aa15.1■□□□□ 0.01
RET-201ENST00000340058 CACUL1Q86Y37 369 aa15.1■□□□□ 0.01
RET-201ENST00000340058 PYROXD2Q8N2H3 581 aa15.1■□□□□ 0.01
RET-201ENST00000340058 TMEM130Q8N3G9 435 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
RET-201ENST00000340058 STKLD1Q8NE28 680 aa15.1■□□□□ 0.01
RET-201ENST00000340058 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
RET-201ENST00000340058 VPS28Q9UK41 221 aa15.1■□□□□ 0.01
RET-201ENST00000340058 C2CD2Q9Y426 696 aa15.1■□□□□ 0.01
RET-201ENST00000340058 ZMYM2Q9UBW7 1377 aa15.09■□□□□ 0.01
RET-201ENST00000340058 E2F6O75461 281 aa15.09■□□□□ 0.01
RET-201ENST00000340058 SLC11A2P49281 568 aa15.09■□□□□ 0.01
RET-201ENST00000340058 ANKRD20A2Q5SQ80 823 aa15.09■□□□□ 0.01
RET-201ENST00000340058 ANKRD20A1Q5TYW2 823 aa15.09■□□□□ 0.01
RET-201ENST00000340058 ZNF470Q6ECI4 717 aa15.09■□□□□ 0.01
RET-201ENST00000340058 PLEKHA7Q6IQ23 1121 aa15.09■□□□□ 0.01
RET-201ENST00000340058 MON1BQ7L1V2 547 aa15.09■□□□□ 0.01
RET-201ENST00000340058 TMC7Q7Z402 723 aa15.09■□□□□ 0.01
RET-201ENST00000340058 SPATA6LQ8N4H0 392 aa15.09■□□□□ 0.01
RET-201ENST00000340058 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
RET-201ENST00000340058 TWNKQ96RR1 684 aa15.09■□□□□ 0.01
RET-201ENST00000340058 NTPCRQ9BSD7 190 aaKnown RBP15.09■□□□□ 0.01
RET-201ENST00000340058 SLC24A3Q9HC58 644 aa15.09■□□□□ 0.01
RET-201ENST00000340058 FAM105AQ9NUU6 356 aa15.09■□□□□ 0.01
RET-201ENST00000340058 PACSIN3Q9UKS6 424 aa15.09■□□□□ 0.01
RET-201ENST00000340058 PKP3Q9Y446 797 aa15.09■□□□□ 0.01
RET-201ENST00000340058 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
RET-201ENST00000340058 MSI1O43347 362 aaKnown RBP15.09■□□□□ 0.01
RET-201ENST00000340058 AP2B1P63010 937 aa15.09■□□□□ 0.01
RET-201ENST00000340058 AGGF1Q8N302 714 aaeCLIP15.09■□□□□ 0.01
RET-201ENST00000340058 ZNF75CPQ92670 426 aaPredicted RBP15.09■□□□□ 0.01
RET-201ENST00000340058 ART4Q93070 314 aa15.09■□□□□ 0.01
RET-201ENST00000340058 ZBTB18Q99592 522 aa15.09■□□□□ 0.01
RET-201ENST00000340058 FRMD8Q9BZ67 464 aaPredicted RBP15.09■□□□□ 0.01
RET-201ENST00000340058 MPP6Q9NZW5 540 aa15.09■□□□□ 0.01
RET-201ENST00000340058 PPME1Q9Y570 386 aa15.09■□□□□ 0.01
RET-201ENST00000340058 MYH10P35580 1976 aa15.09■□□□□ 0.01
RET-201ENST00000340058 MDM4O15151 490 aa15.09■□□□□ 0.01
RET-201ENST00000340058 TSPAN1O60635 241 aa15.09■□□□□ 0.01
RET-201ENST00000340058 FAM155BO75949 473 aa15.09■□□□□ 0.01
RET-201ENST00000340058 SEC24DO94855 1032 aaPredicted RBP15.09■□□□□ 0.01
RET-201ENST00000340058 CYBBP04839 570 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms