RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TAF2Q6P1X5 1199 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 C17orf99Q6UX52 265 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 GPRIN1Q7Z2K8 1008 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 C3orf58Q8NDZ4 430 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 LRRC39Q96DD0 335 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 LRRC37BQ96QE4 947 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 KCNK16Q96T55 309 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 ULBP1Q9BZM6 244 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 FAM105AQ9NUU6 356 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 MIOSQ9NXC5 875 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 SEPT10Q9P0V9 454 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 DCTN4Q9UJW0 460 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 Q9Y3F1 56 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 A0A0A0MRY4 1105 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 MYBPHLA2RUH7 354 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 FYNP06241 537 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 KRT16P08779 473 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 DHRS4L1P0CG22 281 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 CACNA2D1P54289 1103 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 DEUP1Q05D60 604 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 GNASQ5JWF2 1037 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 ASRGL1Q7L266 308 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 RASAL3Q86YV0 1011 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 UNC5BQ8IZJ1 945 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 TRPV1Q8NER1 839 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 KCTD13Q8WZ19 329 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SPATA13Q96N96 652 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SRPK1Q96SB4 655 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 BAIAP2L1Q9UHR4 511 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 STAP1Q9ULZ2 295 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 YJEFN3A6XGL0 299 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 E7ENQ6 273 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 RNF103O00237 685 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 COPEO14579 308 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 TNPO2O14787 897 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 KRT37O76014 449 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 TOMM70O94826 608 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 UNC5CO95185 931 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 ATP6V1G2O95670 118 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SNRPAP09012 282 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 FYB2Q5VWT5 728 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 COLGALT1Q8NBJ5 622 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 CCNYQ8ND76 341 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 GSDMBQ8TAX9 411 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 P2RY11Q96G91 374 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 PCED1BQ96HM7 432 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SLC2A13Q96QE2 648 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SMOQ99835 787 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 SYT15Q9BQS2 421 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 PAAF1Q9BRP4 392 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 XAB2Q9HCS7 855 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 ANLNQ9NQW6 1124 aa15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 RCOR3Q9P2K3 495 aaPredicted RBP15.34■□□□□ 0.05
CLCNKA-201ENST00000331433 WDR27A2RRH5 827 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 VGLL3A8MV65 326 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM72CH0Y354 149 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 H3BRJ5 948 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 M0QZ92 97 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 AP1G2O75843 785 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 AMHP03971 560 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 AKR1A1P14550 325 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 CCNB1P14635 433 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 BGNP21810 368 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 NBPF20Q3BBV1 942 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM72AQ5TYM5 149 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 BSPRYQ5W0U4 402 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM72DQ6L9T8 149 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 CASC4Q6P4E1 433 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM72BQ86X60 149 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 SLC13A1Q9BZW2 595 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 ARHGEF3Q9NR81 526 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 ZNF180Q9UJW8 692 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 STK38LQ9Y2H1 464 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 CASTOR2A6NHX0 329 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 HACD1B0YJ81 288 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 I6L893 689 aaPredicted RBP15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 CAPN9O14815 690 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 RFPL1O75677 317 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 PGK1P00558 417 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 THP07101 528 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 NEFHP12036 1026 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 TARSP26639 723 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 CTGFP29279 349 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 ALDH3A1P30838 453 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 SCNN1GP51170 649 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 MROH9Q5TGP6 573 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 GDF6Q6KF10 455 aaPredicted RBP15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM35AQ86V20 835 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 PSTKQ8IV42 348 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 ZMIZ2Q8NF64 920 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 IQCGQ9H095 443 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 PRDM12Q9H4Q4 367 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms