RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CLIC5Q9NZA1 410 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 COX16Q9P0S2 106 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 HSFX1Q9UBD0 423 aa18.46■□□□□ 0.55
RAB39A-201ENST00000320578 NT5C1B-RDH14C9J2C7 533 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 ALOX15BO15296 676 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 TCEA3O75764 348 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 CPB1P15086 417 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 RBL1P28749 1068 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 PDK1Q15118 436 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 DDR2Q16832 855 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 CMTR2Q8IYT2 770 aaKnown RBP18.45■□□□□ 0.54
RAB39A-201ENST00000320578 ATAD1Q8NBU5 361 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 OR2W6PQ8NHA6 318 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 EPAS1Q99814 870 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 TKTL2Q9H0I9 626 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 C10orf88Q9H8K7 445 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 ANLNQ9NQW6 1124 aa18.45■□□□□ 0.54
RAB39A-201ENST00000320578 I6L893 689 aaPredicted RBP18.44■□□□□ 0.54
RAB39A-201ENST00000320578 CHADO15335 359 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 NCAM2O15394 837 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 KCNN4O15554 427 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 BAIAP3O94812 1187 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 NRG1Q02297 640 aaPredicted RBP18.44■□□□□ 0.54
RAB39A-201ENST00000320578 C6orf118Q5T5N4 469 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 KCNT2Q6UVM3 1135 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 RSPO2Q6UXX9 243 aaPredicted RBP18.44■□□□□ 0.54
RAB39A-201ENST00000320578 PPP1R21Q6ZMI0 780 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 CENPUQ71F23 418 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 TFB1MQ8WVM0 346 aaKnown RBP18.44■□□□□ 0.54
RAB39A-201ENST00000320578 PGM2Q96G03 612 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 SERPINB11Q96P15 392 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 FERMT1Q9BQL6 677 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 ETNK2Q9NVF9 386 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 NINJ2Q9NZG7 142 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 LTBP2Q14767 1821 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 A0A1W2PQH9 124 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 A6NNZ2 444 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 E7ESA3 106 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 CREB3O43889 395 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 UPP2O95045 317 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 VNN2O95498 520 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 YWHAQP27348 245 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 CCR1P32246 355 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 MAGEA4P43358 317 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 GLUD2P49448 558 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 ARL4CP56559 192 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 TPI1P60174 286 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 TUBB8Q3ZCM7 444 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 TAS1R1Q7RTX1 841 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 GPR65Q8IYL9 337 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 TMEM199Q8N511 208 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 FBXO22Q8NEZ5 403 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 NMUR1Q9HB89 426 aa18.44■□□□□ 0.54
RAB39A-201ENST00000320578 OLA1Q9NTK5 396 aaKnown RBP18.44■□□□□ 0.54
RAB39A-201ENST00000320578 COL4A6Q14031 1691 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 TRIM43BA6NCK2 446 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 PPP1R12AO14974 1030 aaPredicted RBP18.43■□□□□ 0.54
RAB39A-201ENST00000320578 SLC2A3P11169 496 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 TSHRP16473 764 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 C1QTNF8P60827 252 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 PRKD1Q15139 912 aaPredicted RBP18.43■□□□□ 0.54
RAB39A-201ENST00000320578 KRT71Q3SY84 523 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 RNF19BQ6ZMZ0 732 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 ZNF276Q8N554 614 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 TRIM43Q96BQ3 446 aaPredicted RBP18.43■□□□□ 0.54
RAB39A-201ENST00000320578 B3GALT6Q96L58 329 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 PGLYRP2Q96PD5 576 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 TMPRSS4Q9NRS4 437 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 OR12D3Q9UGF7 316 aa18.43■□□□□ 0.54
RAB39A-201ENST00000320578 PLXNA3P51805 1871 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 FAM72CH0Y354 149 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SOD2P04179 222 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SHBGP04278 402 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 ERCC2P18074 760 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 LAG3P18627 525 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 HOXC13P31276 330 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 TUFMP49411 452 aaKnown RBP18.42■□□□□ 0.54
RAB39A-201ENST00000320578 KCNJ11Q14654 390 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 HIF1AQ16665 826 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 ACBD5Q5T8D3 534 aaPredicted RBP18.42■□□□□ 0.54
RAB39A-201ENST00000320578 FAM72AQ5TYM5 149 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 HEATR6Q6AI08 1181 aaKnown RBP18.42■□□□□ 0.54
RAB39A-201ENST00000320578 FAM72DQ6L9T8 149 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 FAM72BQ86X60 149 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SLC39A11Q8N1S5 342 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 RNF34Q969K3 372 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 HERC2P3Q9BVR0 1158 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 TTLL2Q9BWV7 592 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 KLC2Q9H0B6 622 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 STK39Q9UEW8 545 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 KCNU1A8MYU2 1149 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 MFSD11O43934 449 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SERPINB6P35237 376 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 PBX3P40426 434 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 GPR15P49685 360 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 SKOR1P84550 965 aa18.42■□□□□ 0.54
RAB39A-201ENST00000320578 MTA1Q13330 715 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms