RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PLSCR1O15162 318 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 PAPSS1O43252 624 aaPredicted RBP16.92■□□□□ 0.3
CLIP4-201ENST00000320081 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 CALB2P22676 271 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 FDFT1P37268 417 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 MAXP61244 160 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 MTFR1Q15390 333 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 TLK2Q86UE8 772 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 CD302Q8IX05 232 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 GIPC2Q8TF65 315 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 ATXN2LQ8WWM7 1075 aaKnown RBP16.92■□□□□ 0.3
CLIP4-201ENST00000320081 MYO7AQ13402 2215 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 KRT36O76013 467 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 IL10P22301 178 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 DAB2P98082 770 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 ALLCQ8N6M5 410 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 TDRD5Q8NAT2 981 aaKnown RBP16.92■□□□□ 0.3
CLIP4-201ENST00000320081 APOPT1Q96IL0 206 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 ASB7Q9H672 318 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 CAB39LQ9H9S4 337 aa16.92■□□□□ 0.3
CLIP4-201ENST00000320081 TPP1O14773 563 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 FSBPO95073 299 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 ERBB2P04626 1255 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 ATICP31939 592 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 LRRC74AQ0VAA2 488 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 CLEC4DQ8WXI8 215 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 MYO1GB0I1T2 1018 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 STX7O15400 261 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 LRCH4O75427 683 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 DNAJC8O75937 253 aaPredicted RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 SERPIND1P05546 499 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 NUDT17P0C025 328 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 PNPLA4P41247 253 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 TBL3Q12788 808 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 UBAP2LQ14157 1087 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 ABHD15Q6UXT9 468 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 UNC5AQ6ZN44 842 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 PCDH20Q8N6Y1 951 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 GLIS1Q8NBF1 620 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 SENP8Q96LD8 212 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 PPCSQ9HAB8 311 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 KIAA1257Q9ULG3 409 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 DTNAQ9Y4J8 743 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 TMEM191CA6NGB0 347 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 SPATA31C2B4DYI2 1134 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 JAM2P57087 298 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 USP4Q13107 963 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 DCAF12L1Q5VU92 463 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 OVOS1Q6IE37 1185 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 OTOAQ7RTW8 1153 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 EXOC2Q96KP1 924 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 MRPL45Q9BRJ2 306 aaKnown RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 TCF7L2Q9NQB0 619 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 NUMA1Q14980 2115 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 MED1Q15648 1581 aaPredicted RBP16.91■□□□□ 0.3
CLIP4-201ENST00000320081 CEP290O15078 2479 aa16.91■□□□□ 0.3
CLIP4-201ENST00000320081 FGFR3P22607 806 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 TUBP50607 506 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 MAPK10P53779 464 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 VEPH1Q14D04 833 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 KCNMB4Q86W47 210 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 PLEKHO2Q8TD55 490 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
CLIP4-201ENST00000320081 MFSD14AQ96MC6 490 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 GPR25O00155 361 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 NR5A2O00482 541 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 FARP2O94887 1054 aaPredicted RBP16.9■□□□□ 0.3
CLIP4-201ENST00000320081 LCA5LO95447 670 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 MMP13P45452 471 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 KRT33BQ14525 404 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 SNX32Q86XE0 403 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 GCNAQ96QF7 691 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 TBCBQ99426 244 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 NDNQ99608 321 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 KATNAL1Q9BW62 490 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 ITGA11Q9UKX5 1188 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 FAM50BQ9Y247 325 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 CASZ1Q86V15 1759 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 CTBP1Q13363 440 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 CLPTM1LQ96KA5 538 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 EML4Q9HC35 981 aaKnown RBP16.9■□□□□ 0.3
CLIP4-201ENST00000320081 GBA2Q9HCG7 927 aaPredicted RBP16.9■□□□□ 0.3
CLIP4-201ENST00000320081 TUBGCP4Q9UGJ1 667 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 GP5P40197 560 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 CPT1AP50416 773 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 FITM2Q8N6M3 262 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 THUMPD3Q9BV44 507 aaKnown RBP16.9■□□□□ 0.3
CLIP4-201ENST00000320081 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
CLIP4-201ENST00000320081 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms