RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HLA-FP30511 346 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 MPLP40238 635 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 HARS2P49590 506 aaKnown RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 PITX1P78337 314 aaPredicted RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 NUDT18Q6ZVK8 323 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 KIAA0907Q7Z7F0 614 aaPredicted RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 FAM71AQ8IYT1 594 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 CHPFQ8IZ52 775 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 WFDC5Q8TCV5 224 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 IPO4Q8TEX9 1081 aaKnown RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 CPXM1Q96SM3 734 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 NAA15Q9BXJ9 866 aaKnown RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 SLC2A11Q9BYW1 496 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 ST7Q9NRC1 585 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 THAP10Q9P2Z0 257 aaPredicted RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 RAD54BQ9Y620 910 aa20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 GOLGA6L7A0A1B0GV03 622 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 KCNJ18B7U540 433 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 MED7O43513 233 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 TSPAN3O60637 253 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 IL12RB1P42701 662 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 ACADSBP45954 432 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 NNTQ13423 1086 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 KCNJ12Q14500 433 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 TAF5Q15542 800 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 TPD52L1Q16890 204 aaPredicted RBP20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 MPPE1Q53F39 396 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 CDKAL1Q5VV42 579 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 TAC4Q86UU9 113 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 SLC47A2Q86VL8 602 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 FAM114A1Q8IWE2 563 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 ENOX1Q8TC92 643 aaKnown RBP20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 AZIN2Q96A70 460 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 LMLNQ96KR4 655 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 CD93Q9NPY3 652 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 CALCOCO1Q9P1Z2 691 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 DACH1Q9UI36 760 aa20.64■□□□□ 0.89
PDZRN3-202ENST00000308537 NCAM1P13591 858 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 PRKCSHP14314 528 aaPredicted RBP20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 NDUFV2P19404 249 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 TBX4P57082 545 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 ZNF445P59923 1031 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 ELF2Q15723 593 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 TCP11X2Q5H9J9 407 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 PIK3R6Q5UE93 754 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 TCEAL6Q6IPX3 200 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 RFWD3Q6PCD5 774 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 ANKS1BQ7Z6G8 1248 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 C11orf74Q86VG3 221 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 NETO1Q8TDF5 533 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 DDI1Q8WTU0 396 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 TCEAL3Q969E4 200 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 PRICKLE1Q96MT3 831 aaPredicted RBP20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 SLC6A17Q9H1V8 727 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 LHX5Q9H2C1 402 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 ELOVL2Q9NXB9 296 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 NFE2L3Q9Y4A8 694 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 FHOD1Q9Y613 1164 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 STON1Q9Y6Q2 735 aa20.63■□□□□ 0.89
PDZRN3-202ENST00000308537 CACNA1EQ15878 2313 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 MED19A0JLT2 244 aaPredicted RBP20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 SLC30A4O14863 429 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 SART1O43290 800 aaKnown RBP20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 ACSL4O60488 711 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 RHOBTB1O94844 696 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 CYBBP04839 570 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 C7P10643 843 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 GBP1P32455 592 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 KLHDC7AQ5VTJ3 777 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 NUGGCQ68CJ6 796 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 ADIPOR2Q86V24 386 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 ADAM32Q8TC27 787 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 SORCS1Q8WY21 1168 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 ERLEC1Q96DZ1 483 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 MRGPRX1Q96LB2 322 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 XPO7Q9UIA9 1087 aaKnown RBP20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 TLR6Q9Y2C9 796 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 NUMA1Q14980 2115 aa20.62■□□□□ 0.89
PDZRN3-202ENST00000308537 TM4SF5O14894 197 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 IRAK2O43187 625 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 EEF1GP26641 437 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 USP8P40818 1118 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 PTGER3P43115 390 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 LIMK1P53667 647 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 EIF4HQ15056 248 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 PTPN20Q4JDL3 420 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 MPP7Q5T2T1 576 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 C11orf57Q6ZUT1 292 aaPredicted RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 DGLUCYQ7Z3D6 616 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 PASD1Q8IV76 773 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 UNC45BQ8IWX7 931 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 C1orf131Q8NDD1 294 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 DDX1Q92499 740 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 FAM149B1Q96BN6 582 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 TMA16Q96EY4 203 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 SERPINB11Q96P15 392 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 SLC2A13Q96QE2 648 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 RTKNQ9BST9 563 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms