RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FGF3P11487 239 aaPredicted RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 CRHR1P34998 444 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 SERPINB8P50452 374 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 THOP1P52888 689 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 PGGT1BP53609 377 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 CDKL1Q00532 357 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 MYBPC1Q00872 1141 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 MBLAC2Q68D91 279 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 EME1Q96AY2 570 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 UNKQ9C0B0 810 aaKnown RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 COG4Q9H9E3 785 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 TRMUO75648 421 aaKnown RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 TNFAIP8O95379 198 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 IMPDH2P12268 514 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 RPL10P27635 214 aaKnown RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 CCR3P51677 355 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 KLF10Q13118 480 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 SNAPC2Q13487 334 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 PDE1CQ14123 709 aaPredicted RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 C16orf72Q14CZ0 275 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 NOMO1Q15155 1222 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 DUS1LQ6P1R4 473 aaKnown RBP15.1■□□□□ 0.01
COL6A2-201ENST00000300527 ZNF781Q8N8C0 355 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 GRIN3AQ8TCU5 1115 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 OR52B2Q96RD2 323 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 ADA2Q9NZK5 511 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 ARHGAP28Q9P2N2 729 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 ITGA11Q9UKX5 1188 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 DOLKQ9UPQ8 538 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 PSAT1Q9Y617 370 aa15.1■□□□□ 0.01
COL6A2-201ENST00000300527 CHADO15335 359 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SERPINE1P05121 402 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 EPHA3P29320 983 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SLC5A2P31639 672 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ARRB2P32121 409 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 CCR10P46092 362 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 STT3AP46977 705 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 YWHAEP62258 255 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 TUBB3Q13509 450 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 TFDP2Q14188 446 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 GRM2Q14416 872 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 RXFP2Q8WXD0 754 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PIWIL1Q96J94 861 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 MAGEB5Q9BZ81 275 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 XPNPEP3Q9NQH7 507 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ADCY6O43306 1168 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 LSM8O95777 96 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 FUT4P22083 530 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 CDH15P55291 814 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 KRT80Q6KB66 452 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ADGRG6Q86SQ4 1221 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ZNF512Q96ME7 567 aaPredicted RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 HEXIM2Q96MH2 286 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PPP1R16BQ96T49 567 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 TCRBV5S1A1TA0A578 114 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 APOL1O14791 398 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 RGL2O15211 777 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 STRNO43815 780 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ATP9BO43861 1147 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SEC24DO94855 1032 aaPredicted RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ASS1P00966 412 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PSAPP07602 524 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ERVK-10P10266 1014 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 MLH1P40692 756 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 ART3Q13508 389 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 TMEM198Q66K66 360 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 LPCAT2Q7L5N7 544 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 RCN3Q96D15 328 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PKP2Q99959 881 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 NTPCRQ9BSD7 190 aaKnown RBP15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 HMGXB4Q9UGU5 601 aa15.09■□□□□ 0.01
COL6A2-201ENST00000300527 PLIN3O60664 434 aa15.08■□□□□ 0.01
COL6A2-201ENST00000300527 PTPN7P35236 360 aa15.08■□□□□ 0.01
COL6A2-201ENST00000300527 PSMD7P51665 324 aa15.08■□□□□ 0.01
COL6A2-201ENST00000300527 TRPV6Q9H1D0 765 aa15.08■□□□□ 0.01
COL6A2-201ENST00000300527 ASNSD1Q9NWL6 643 aa15.08■□□□□ 0.01
COL6A2-201ENST00000300527 NR3C2P08235 984 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 ACTR2P61160 394 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 ABCE1P61221 599 aaKnown RBP15.08■□□□□ 0
COL6A2-201ENST00000300527 CA9Q16790 459 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 FSCBQ5H9T9 825 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 STRIP1Q5VSL9 837 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 ITPRIPL1Q6GPH6 555 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 PPP1R2P3Q6NXS1 205 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 RNF168Q8IYW5 571 aaPredicted RBP15.08■□□□□ 0
COL6A2-201ENST00000300527 PLD5Q8N7P1 536 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 MAPK15Q8TD08 544 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 SLC7A3Q8WY07 619 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 C20orf96Q9NUD7 363 aaPredicted RBP15.08■□□□□ 0
COL6A2-201ENST00000300527 EMCNQ9ULC0 261 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0
COL6A2-201ENST00000300527 SYNJ2BP-COX16A0A087WUM0 186 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 GABRB2P47870 512 aa15.08■□□□□ 0
COL6A2-201ENST00000300527 MAPK10P53779 464 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms