RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ZNF513Q8N8E2 541 aaPredicted RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 MRPL40Q9NQ50 206 aaKnown RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 AAASQ9NRG9 546 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 TMEM191CA6NGB0 347 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 PTGES3LE9PB15 166 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 ZNF189O75820 626 aaPredicted RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 MICAL2O94851 1124 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 RTN3O95197 1032 aaPredicted RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 VTNP04004 478 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 TRPC1P48995 793 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 CCR3P51677 355 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 STX5Q13190 355 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 KIZQ2M2Z5 673 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 UNC5BQ8IZJ1 945 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 PCYOX1LQ8NBM8 494 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 RIN3Q8TB24 985 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 PLEKHO2Q8TD55 490 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 C17orf75Q9HAS0 396 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 PALMDQ9NP74 551 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 DDIT4Q9NX09 232 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 RRN3Q9NYV6 651 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 TJP2Q9UDY2 1190 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 COMMD3-BMI1R4GMX3 469 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 ALBP02768 609 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 PGK2P07205 417 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 UQCRBP14927 111 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 MSS51Q4VC12 460 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 RNASEH2BQ5TBB1 312 aaKnown RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 MIER2Q8N344 545 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 OR52K1Q8NGK4 314 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 HERPUD2Q9BSE4 406 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
USP43-201ENST00000285199 AFF4Q9UHB7 1163 aaKnown RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 DRG1Q9Y295 367 aaKnown RBP16.12■□□□□ 0.17
USP43-201ENST00000285199 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 M0QZ92 97 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 SNX2O60749 519 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 OR6B1O95007 311 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 ITGAVP06756 1048 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 MRPS15P82914 257 aaKnown RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 CCDC15Q0P6D6 951 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 PTPN20Q4JDL3 420 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 ADCK1Q86TW2 530 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 TSPAN14Q8NG11 270 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 OTUD5Q96G74 571 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 ZNF358Q9NW07 568 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 C9JVG2 144 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 LIN7AO14910 233 aaPredicted RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 ADSSP30520 456 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 EIF2B2P49770 351 aaKnown RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 ITGADQ13349 1161 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 PERM1Q5SV97 790 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 UNC5AQ6ZN44 842 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 TMC7Q7Z402 723 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 CEP19Q96LK0 163 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 NPAS2Q99743 824 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 PREBQ9HCU5 417 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 UTP6Q9NYH9 597 aaKnown RBP16.11■□□□□ 0.17
USP43-201ENST00000285199 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 RNF103O00237 685 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 VAPBO95292 243 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 HMBSP08397 361 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 NR4A1P22736 598 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 BBS12Q6ZW61 710 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 FBXW8Q8N3Y1 598 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 ZNF398Q8TD17 642 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 SEC14L1Q92503 715 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 LGALS13Q9UHV8 139 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 ACOT9Q9Y305 439 aa16.11■□□□□ 0.17
USP43-201ENST00000285199 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 MYO1GB0I1T2 1018 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 CLOCKO15516 846 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 ADCY6O43306 1168 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 MT-ND1P03886 318 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 STAG3L1P0CL83 205 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 HNRNPLP14866 589 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP43-201ENST00000285199 GP5P40197 560 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 NAMPTP43490 491 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 PPM1FP49593 454 aaPredicted RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 TNFAIP2Q03169 654 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 MICU2Q8IYU8 434 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 DACH2Q96NX9 599 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 NR1H4Q96RI1 486 aaPredicted RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 RBMX2Q9Y388 322 aaKnown RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 ZNF536O15090 1300 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 ACO1P21399 889 aaKnown RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 RAB27AP51159 221 aa16.1■□□□□ 0.17
USP43-201ENST00000285199 ABCE1P61221 599 aaKnown RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 LSM3P62310 102 aaKnown RBP16.1■□□□□ 0.17
USP43-201ENST00000285199 MXD4Q14582 209 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms