RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	RAB6C	Q9H0N0	254 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	SMOC2	Q9H3U7	446 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	PIGV	Q9NUD9	493 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	COX16	Q9P0S2	106 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	CSH1	P0DML2	217 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	CSH2	P0DML3	217 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	STIP1	P31948	543 aa	Known RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	CCR1	P32246	355 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	KCNJ1	P48048	391 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	HCAR3	P49019	387 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	VCP	P55072	806 aa	Known RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	MRPS25	P82663	173 aa	Known RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	CALCOCO2	Q13137	446 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	NNT	Q13423	1086 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	TAF12	Q16514	161 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	PDZD4	Q76G19	769 aa	Predicted RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	ANKS1B	Q7Z6G8	1248 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	ZNF276	Q8N554	614 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	CCDC185	Q8N715	623 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	DQX1	Q8TE96	717 aa	Known RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	ATG4A	Q8WYN0	398 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	WDR6	Q9NNW5	1121 aa	Known RBP	13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	LZTS1	Q9Y250	596 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	PLXNA3	P51805	1871 aa		13.01	□□□□□ -0.33
PATJ-215	ENST00000635137	GREB1	Q4ZG55	1949 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	CTSA	P10619	480 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	HTR7	P34969	479 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	KPNA1	P52294	538 aa	Predicted RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	ATXN1	P54253	815 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	DYNLT1	P63172	113 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	OTUD4	Q01804	1114 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	ADCY2	Q08462	1091 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	VEPH1	Q14D04	833 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	OTUD1	Q5VV17	481 aa	Predicted RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	SLC9A4	Q6AI14	798 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	MSANTD2	Q6P1R3	559 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	ACTL9	Q8TC94	416 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	SP7	Q8TDD2	431 aa	Predicted RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	CASKIN2	Q8WXE0	1202 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	TTLL2	Q9BWV7	592 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	ADAM33	Q9BZ11	813 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	UBE2O	Q9C0C9	1292 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	ACBD3	Q9H3P7	528 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	GPATCH2L	Q9NWQ4	482 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	R3HDM2	Q9Y2K5	976 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137		A0A1W2PQH9	124 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	SLC38A8	A6NNN8	435 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	IGLV3-25	P01717	112 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	RPL17	P18621	184 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	ITIH2	P19823	946 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	IL4R	P24394	825 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	PPP3CC	P48454	512 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	CARS	P49589	748 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	GPR15	P49685	360 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	CAV1	Q03135	178 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	PLD1	Q13393	1074 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	PTK6	Q13882	451 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	PPP2R5D	Q14738	602 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	SCD5	Q86SK9	330 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	SLC35B2	Q8TB61	432 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	DPF3	Q92784	378 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	HAPLN3	Q96S86	360 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	EPAS1	Q99814	870 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	FERMT1	Q9BQL6	677 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	PLEKHA4	Q9H4M7	779 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	CYP4F11	Q9HBI6	524 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	RXFP1	Q9HBX9	757 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	CXXC1	Q9P0U4	656 aa	Predicted RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	MTRF1L	Q9UGC7	380 aa	Known RBP	13	□□□□□ -0.33
PATJ-215	ENST00000635137	SLC12A6	Q9UHW9	1150 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	DNPEP	Q9ULA0	475 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	NFU1	Q9UMS0	254 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	KIAA1671	Q9BY89	1806 aa		13	□□□□□ -0.33
PATJ-215	ENST00000635137	COL4A4	P53420	1690 aa	Predicted RBP	12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	CFAP69	A5D8W1	941 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	IRAK2	O43187	625 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	DAPK3	O43293	454 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	VNN2	O95498	520 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	BMPR1A	P36894	532 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	EIF3E	P60228	445 aa	Known RBP	12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	PITX1	P78337	314 aa	Predicted RBP	12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	TAF10	Q12962	218 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	MMRN1	Q13201	1228 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	OASL	Q15646	514 aa	Known RBP	12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	CA9	Q16790	459 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	SDHAF4	Q5VUM1	108 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	LEKR1	Q6ZMV7	388 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	TAC4	Q86UU9	113 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	TCEAL8	Q8IYN2	117 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	TTC9B	Q8N6N2	239 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	PLD5	Q8N7P1	536 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	STKLD1	Q8NE28	680 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	ADAM32	Q8TC27	787 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	AEN	Q8WTP8	325 aa	Known RBP	12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	RSAD2	Q8WXG1	361 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	CSPG4P5	Q96PW8	444 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	HINFP	Q9BQA5	517 aa		12.99	□□□□□ -0.33
PATJ-215	ENST00000635137	TRIM51	Q9BSJ1	452 aa		12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms