RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 HTR3CQ8WXA8 447 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 UTP4Q969X6 686 aaKnown RBP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 QKIQ96PU8 341 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 TMPRSS4Q9NRS4 437 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 GDAP2Q9NXN4 497 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 HEY2Q9UBP5 337 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 MBLAC1A4D2B0 266 aaPredicted RBP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 KRT38O76015 456 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 AXLP30530 894 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 RASSF2P50749 326 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 SV2CQ496J9 727 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 BSPRYQ5W0U4 402 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 CHSY1Q86X52 802 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 B3GALNT2Q8NCR0 500 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 PIH1D1Q9NWS0 290 aaKnown RBP16.49■□□□□ 0.23
TRIM46-211ENST00000611379 KANSL3Q9P2N6 904 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
TRIM46-211ENST00000611379 MYL3P08590 195 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 LILRA4P59901 499 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 NME3Q13232 169 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ANKRD20A2Q5SQ80 823 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ANKRD20A1Q5TYW2 823 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ANKRD20A3Q5VUR7 823 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 STRADAQ7RTN6 431 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 CLNKQ7Z7G1 428 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 CCNYQ8ND76 341 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ARMC2Q8NEN0 867 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 MECRQ9BV79 373 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 CEP41Q9BYV8 373 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 GLTPD2A6NH11 291 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 CREB3O43889 395 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 TPSB2P20231 275 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 MAP2K2P36507 400 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 SARNPP82979 210 aaKnown RBP16.48■□□□□ 0.23
TRIM46-211ENST00000611379 AP1B1Q10567 949 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 TPSAB1Q15661 275 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 SLC25A52Q3SY17 297 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ACCSLQ4AC99 568 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ARCQ7LC44 396 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 OSTM1Q86WC4 334 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 DEPDC1BQ8WUY9 529 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 SLC7A6OSQ96CW6 309 aaPredicted RBP16.48■□□□□ 0.23
TRIM46-211ENST00000611379 PTPN18Q99952 460 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 LRRC4Q9HBW1 653 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
TRIM46-211ENST00000611379 SEPT10Q9P0V9 454 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 IPPQ9Y573 584 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 NUMBLQ9Y6R0 609 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 PLXNB2O15031 1838 aa16.48■□□□□ 0.23
TRIM46-211ENST00000611379 XPO1O14980 1071 aaKnown RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 BEST1O76090 585 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 VAV1P15498 845 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 SCNN1AP37088 669 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 NDUFV1P49821 464 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 CRADDP78560 199 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PRKD1Q15139 912 aaPredicted RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 UBXN11Q5T124 520 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 NME8Q8N427 588 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 TBC1D10AQ9BXI6 508 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 FZD10Q9ULW2 581 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 C2orf71A6NGG8 1288 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 ANP32DO95626 131 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 CCND1P24385 295 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PSEN2P49810 448 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 BEX3Q00994 111 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 LONP2Q86WA8 852 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 INPP5DQ92835 1189 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 TMEM120AQ9BXJ8 343 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 DUSP16Q9BY84 665 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 GNEQ9Y223 722 aaKnown RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PLLPQ9Y342 182 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 M0QYT0 321 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 CYB561D2O14569 222 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 RFPL1O75677 317 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 TOMM70O94826 608 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 RPSAP08865 295 aaKnown RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 GSTA2P09210 222 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 KCNE1P15382 129 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 MAGEA3P43357 314 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 RPL34P49207 117 aaKnown RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 SESN2P58004 480 aaPredicted RBP16.47■□□□□ 0.23
TRIM46-211ENST00000611379 CBLBQ13191 982 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 SEMA5AQ13591 1074 aa16.47■□□□□ 0.23
TRIM46-211ENST00000611379 PARP6Q2NL67 630 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms