RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ATG2BQ96BY7 2078 aa17.27■□□□□ 0.35
LINC00240-203ENST00000606878 MSI1O43347 362 aaKnown RBP17.26■□□□□ 0.35
LINC00240-203ENST00000606878 GFRA3O60609 400 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 GFPT2O94808 682 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 CAVIN2O95810 425 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 LATS1O95835 1130 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 LMNAP02545 664 aaKnown RBP17.26■□□□□ 0.35
LINC00240-203ENST00000606878 SOX5P35711 763 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 SLC11A2P49281 568 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 ZNF445P59923 1031 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 RING1Q06587 406 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 MESP2Q0VG99 397 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 SYPL2Q5VXT5 272 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 NUGGCQ68CJ6 796 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
LINC00240-203ENST00000606878 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 ZNF677Q86XU0 584 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 PHTF2Q8N3S3 785 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
LINC00240-203ENST00000606878 DDI1Q8WTU0 396 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 BHMTQ93088 406 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 TMA16Q96EY4 203 aaKnown RBP17.26■□□□□ 0.35
LINC00240-203ENST00000606878 SERPINB11Q96P15 392 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 ASNSD1Q9NWL6 643 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 PLK2Q9NYY3 685 aa17.26■□□□□ 0.35
LINC00240-203ENST00000606878 MYO16Q9Y6X6 1858 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 LILRB5O75023 590 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 PENKP01210 267 aaPredicted RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CDH5P33151 784 aaPredicted RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CNR2P34972 360 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 FNTBP49356 437 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 DGKGP49619 791 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 JAM2P57087 298 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 TPM4P67936 248 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CDK17Q00537 523 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 SLC6A3Q01959 620 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 DMC1Q14565 340 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 IQCB1Q15051 598 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 TAF5Q15542 800 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 HSF5Q4G112 596 aaPredicted RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 MPPE1Q53F39 396 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 C10orf76Q5T2E6 689 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 EMC10Q5UCC4 262 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 TOGARAM2Q6ZUX3 1019 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 NOP9Q86U38 636 aaKnown RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 ERICH1Q86X53 443 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 ZDHHC17Q8IUH5 632 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 FAM217AQ8IXS0 508 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CCDC33Q8N5R6 958 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 DDX1Q92499 740 aaKnown RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 C18orf8Q96DM3 657 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 DDX50Q9BQ39 737 aaKnown RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
LINC00240-203ENST00000606878 TJP2Q9UDY2 1190 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 STOML2Q9UJZ1 356 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 FBXO10Q9UK96 956 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 TLR6Q9Y2C9 796 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 FAM186AA6NE01 2351 aa17.25■□□□□ 0.35
LINC00240-203ENST00000606878 CCDC163A0A0D9SF12 145 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 PRR23AA6NEV1 266 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 TRIM24O15164 1050 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 EPHB6O15197 1021 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 HSF2BPO75031 334 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 LSM8O95777 96 aaKnown RBP17.24■□□□□ 0.35
LINC00240-203ENST00000606878 IGLV3-27P01718 113 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 GBP1P32455 592 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 TIE1P35590 1138 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 NNTQ13423 1086 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 FYB2Q5VWT5 728 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 ASCL5Q7RTU5 278 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 CACNA2D4Q7Z3S7 1137 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 SFTPA1Q8IWL2 248 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 DEFB106AQ8N104 65 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 TERB1Q8NA31 727 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 ADAM32Q8TC27 787 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 SLC2A11Q9BYW1 496 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 IRX2Q9BZI1 471 aaPredicted RBP17.24■□□□□ 0.35
LINC00240-203ENST00000606878 POLR3BQ9NW08 1133 aaPredicted RBP17.24■□□□□ 0.35
LINC00240-203ENST00000606878 STARD13Q9Y3M8 1113 aa17.24■□□□□ 0.35
LINC00240-203ENST00000606878 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 ACSL4O60488 711 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 TSPAN3O60637 253 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 KLF8O95600 359 aaPredicted RBP17.23■□□□□ 0.35
LINC00240-203ENST00000606878 APBB3O95704 486 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
LINC00240-203ENST00000606878 ERBB2P04626 1255 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 MMEP08473 750 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 KIR2DL1P43626 348 aaPredicted RBP17.23■□□□□ 0.35
LINC00240-203ENST00000606878 CDR2Q01850 454 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 DMWDQ09019 674 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 PTPN20Q4JDL3 420 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 EOGTQ5NDL2 527 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 SDE2Q6IQ49 451 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 FAM183BPQ6ZVS7 135 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 TRMT11Q7Z4G4 463 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms