RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DENND2CQ68D51 928 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 DENND5BQ6ZUT9 1274 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 TAS1R1Q7RTX1 841 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 DDX53Q86TM3 631 aaKnown RBP20.79■□□□□ 0.92
PNKP-214ENST00000600573 PLD5Q8N7P1 536 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 FOXP3Q9BZS1 431 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 WDCPQ9H6R7 721 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 PCDH9Q9HC56 1237 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 WDR6Q9NNW5 1121 aaKnown RBP20.79■□□□□ 0.92
PNKP-214ENST00000600573 PIGVQ9NUD9 493 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 MTMR10Q9NXD2 777 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.79■□□□□ 0.921e-7■■■□□ 14.9
PNKP-214ENST00000600573 ADAM21Q9UKJ8 722 aa20.79■□□□□ 0.92
PNKP-214ENST00000600573 IGLV3-25P01717 112 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 RARGP13631 454 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 PBX3P40426 434 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 VPS41P49754 854 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 ATXN1P54253 815 aaKnown RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 GYS2P54840 703 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 ARPP19P56211 112 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 EIF3EP60228 445 aaKnown RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 ZNF844Q08AG5 666 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 MMRN1Q13201 1228 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CA9Q16790 459 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 PCGF5Q86SE9 256 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 ATAD1Q8NBU5 361 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 PCDH19Q8TAB3 1148 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 RNF139Q8WU17 664 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 RSAD2Q8WXG1 361 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 ARL8AQ96BM9 186 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 KCTD15Q96SI1 283 aaPredicted RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 YME1L1Q96TA2 773 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 GPATCH2LQ9NWQ4 482 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CLIC5Q9NZA1 410 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CALCOCO1Q9P1Z2 691 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 SSX2IPQ9Y2D8 614 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CDY1Q9Y6F8 540 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 NLRC5Q86WI3 1866 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 NUDT17P0C025 328 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 MYZAPP0CAP1 466 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 YWHAQP27348 245 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 HTR7P34969 479 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CREMQ03060 361 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 DDR2Q16832 855 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 MGAT5BQ3V5L5 792 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 RNF19BQ6ZMZ0 732 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 TRMT10CQ7L0Y3 403 aaKnown RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 PQLC3Q8N755 202 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 COLGALT1Q8NBJ5 622 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 DQX1Q8TE96 717 aaKnown RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 B3GALT6Q96L58 329 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 PGLYRP2Q96PD5 576 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 CSPG4P5Q96PW8 444 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 SMOC2Q9H3U7 446 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 PSD3Q9NYI0 1048 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 AFF4Q9UHB7 1163 aaKnown RBP20.78■□□□□ 0.92
PNKP-214ENST00000600573 PCDHB12Q9Y5F1 795 aa20.78■□□□□ 0.92
PNKP-214ENST00000600573 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 HMGB1P1B2RPK0 211 aaPredicted RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 SGK1O00141 431 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 SMAPO00193 183 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 RBP3P10745 1247 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 GLUD2P49448 558 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 CDR1P51861 262 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 FPGSQ05932 587 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 EIF4EBP2Q13542 120 aaPredicted RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 RSPO2Q6UXX9 243 aaPredicted RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 C4orf22Q6V702 233 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 PDZD4Q76G19 769 aaPredicted RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 EDEM1Q92611 657 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 OSBPL2Q9H1P3 480 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 TMBIM4Q9HC24 238 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.77■□□□□ 0.92
PNKP-214ENST00000600573 OLA1Q9NTK5 396 aaKnown RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 CWC15Q9P013 229 aaKnown RBP20.77■□□□□ 0.92
PNKP-214ENST00000600573 RAD54BQ9Y620 910 aa20.77■□□□□ 0.92
PNKP-214ENST00000600573 DNALI1O14645 258 aaPredicted RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 TP73O15350 636 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 ACRP10323 421 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 SLC2A3P11169 496 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 PITX1P78337 314 aaPredicted RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 ROR1Q01973 937 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 IFFO1Q0D2I5 559 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 MTA1Q13330 715 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 ACBD5Q5T8D3 534 aaPredicted RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 MSANTD2Q6P1R3 559 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 PRSS55Q6UWB4 352 aaPredicted RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 SCD5Q86SK9 330 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 HOOK3Q86VS8 718 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 CCDC25Q86WR0 208 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 ZNF461Q8TAF7 563 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 ATP6V1G3Q96LB4 118 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 SERPINB11Q96P15 392 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 HAPLN3Q96S86 360 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 EPB41L4BQ9H329 900 aa20.76■□□□□ 0.91
PNKP-214ENST00000600573 TLR8Q9NR97 1041 aaKnown RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 MRPL42Q9Y6G3 142 aaKnown RBP20.76■□□□□ 0.91
PNKP-214ENST00000600573 SYNJ2BP-COX16A0A087WUM0 186 aa20.75■□□□□ 0.91
PNKP-214ENST00000600573 HTRA4P83105 476 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms