RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
TGFB1-204ENST00000600196 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 KIAA1524Q8TCG1 905 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 USP13Q92995 863 aaPredicted RBP12.78□□□□□ -0.36
TGFB1-204ENST00000600196 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 FAM204AQ9H8W3 233 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 CPQQ9Y646 472 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 ANAPC1Q9H1A4 1944 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 SLC12A8A0AV02 714 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 RCCD1A6NED2 376 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ZNF487B1APH4 448 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 LEFTY2O00292 366 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 MDM4O15151 490 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 GRAP2O75791 330 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 STC2O76061 302 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 TBX18O95935 607 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 KRT7P08729 469 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ADRA1BP35368 520 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 FCHO2Q0JRZ9 810 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 USP4Q13107 963 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 PDGFRLQ15198 375 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ZNF77Q15935 545 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 MPP7Q5T2T1 576 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ADGRF1Q5T601 910 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.37
TGFB1-204ENST00000600196 Q6ZNB5 142 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 EMC1Q8N766 993 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 FCRL2Q96LA5 508 aaPredicted RBP12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ZSWIM3Q96MP5 696 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 MYADMQ96S97 322 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 DESI2Q9BSY9 194 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 APOL5Q9BWW9 433 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
TGFB1-204ENST00000600196 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
TGFB1-204ENST00000600196 C2orf16Q68DN1 1984 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 MIF4GDA9UHW6 222 aaKnown RBP12.76□□□□□ -0.37
TGFB1-204ENST00000600196 CHADO15335 359 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
TGFB1-204ENST00000600196 PRPSAP2O60256 369 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 GREM1O60565 184 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 GJA1P17302 382 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 PSMC3P17980 439 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 HCAR3P49019 387 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 HDAC4P56524 1084 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 OGDHQ02218 1023 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 C5orf22Q49AR2 442 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
TGFB1-204ENST00000600196 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 MIB1Q86YT6 1006 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
TGFB1-204ENST00000600196 SH3RF2Q8TEC5 729 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 RNF34Q969K3 372 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 RCOR3Q9P2K3 495 aaPredicted RBP12.76□□□□□ -0.37
TGFB1-204ENST00000600196 SFMBT1Q9UHJ3 866 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 ALG6Q9Y672 507 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■□□□□ 9.4
TGFB1-204ENST00000600196 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
TGFB1-204ENST00000600196 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 PSTPIP1O43586 416 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 ACSL4O60488 711 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-204ENST00000600196 OBSL1O75147 1896 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 LRCH4O75427 683 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 GLULP15104 373 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 FCARP24071 287 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 L1CAMP32004 1257 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
TGFB1-204ENST00000600196 ATP11AP98196 1134 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 AMPD2Q01433 879 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 HTR4Q13639 388 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 PDK2Q15119 407 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 CLUL1Q15846 466 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 STXBP5Q5T5C0 1151 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 OTUD1Q5VV17 481 aaPredicted RBP12.75□□□□□ -0.37
TGFB1-204ENST00000600196 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 LRRC57Q8N9N7 239 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 FAM71BQ8TC56 605 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 OSCP1Q8WVF1 389 aa12.75□□□□□ -0.37
TGFB1-204ENST00000600196 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms