RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MMEP08473 750 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 CISD3P0C7P0 127 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 NCAM1P13591 858 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 CDK11BP21127 795 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 KRT9P35527 623 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 GRIA2P42262 883 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 KIR2DL1P43626 348 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 BPIFB4P59827 614 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 EMC10Q5UCC4 262 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 FYB2Q5VWT5 728 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 OLFML1Q6UWY5 402 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 TOGARAM2Q6ZUX3 1019 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 BEND5Q7L4P6 421 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 CPXM2Q8N436 756 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 TERB1Q8NA31 727 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC20A1Q8WUM9 679 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 BHMTQ93088 406 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 EXOC4Q96A65 974 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM149B1Q96BN6 582 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 FCRL2Q96LA5 508 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 ZDHHC4Q9NPG8 344 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 DNAJC17Q9NVM6 304 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 ZSCAN32Q9NX65 697 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 FBXO10Q9UK96 956 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 CLEC4EQ9ULY5 219 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 ZNF510Q9Y2H8 683 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 PCDHGA2Q9Y5H1 932 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 THADAQ6YHU6 1953 aa11.46□□□□□ -0.58
SHKBP1-206ENST00000595523 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SMTNL1A8MU46 457 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 APODP05090 189 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 HNRNPLP14866 589 aaKnown RBP eCLIP11.45□□□□□ -0.581e-11■■■■□ 20.2
SHKBP1-206ENST00000595523 CHRNB2P17787 502 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 HOXA6P31267 233 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SOX5P35711 763 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 CHKAP35790 457 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 FNTBP49356 437 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 YWHAZP63104 245 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 NOMO3P69849 1222 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 RING1Q06587 406 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 EIF4EBP2Q13542 120 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 C2orf27AQ580R0 203 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 FAM133BQ5BKY9 247 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 NADSYN1Q6IA69 706 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SUMF1Q8NBK3 374 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 GOLGA1Q92805 767 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC39A13Q96H72 371 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 NAP1L5Q96NT1 182 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 POPDC2Q9HBU9 364 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 CBX8Q9HC52 389 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 DEC1Q9P2X7 70 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 GON4LQ3T8J9 2241 aa11.45□□□□□ -0.58
SHKBP1-206ENST00000595523 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 GOLGA6L7A0A1B0GV03 622 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 PRRT4C9JH25 899 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 IRAK2O43187 625 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 GFRA3O60609 400 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ATG13O75143 517 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 GRAP2O75791 330 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 LATS1O95835 1130 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 PTMSP20962 102 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC6A4P31645 630 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 TNFRSF4P43489 277 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 GABRB2P47870 512 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 PXNP49023 591 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 HARS2P49590 506 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 SGSHP51688 502 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 TBX4P57082 545 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 FMO1Q01740 532 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 NNTQ13423 1086 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 DMC1Q14565 340 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 PPP2R5DQ14738 602 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 C10orf76Q5T2E6 689 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ADGRF1Q5T601 910 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 OTUD1Q5VV17 481 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 HEATR6Q6AI08 1181 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ZC3H14Q6PJT7 736 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC26A9Q7LBE3 791 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 DEFB106AQ8N104 65 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 TMEM35BQ8NCS4 154 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 NEK11Q8NG66 645 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms