RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 DCAF6Q58WW2 860 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 ZC3H12AQ5D1E8 599 aaKnown RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 OTUD1Q5VV17 481 aaPredicted RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 NADSYN1Q6IA69 706 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 TRNP1Q6NT89 227 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 RFWD3Q6PCD5 774 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 MMS22LQ6ZRQ5 1243 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 XYLT1Q86Y38 959 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 PLD4Q96BZ4 506 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 OTUB2Q96DC9 234 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 BBS2Q9BXC9 721 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 SYNCQ9H7C4 482 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 ARHGEF4Q9NR80 690 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 COX16Q9P0S2 106 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 CALCOCO1Q9P1Z2 691 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 HCN2Q9UL51 889 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 PTPRZ1P23471 2315 aaPredicted RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 KIAA1549LQ6ZVL6 1849 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 A0A1W2PQC6 194 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SART1O43290 800 aaKnown RBP12□□□□□ -0.49
VMP1-211ENST00000591315 TRUB2O95900 331 aaKnown RBP12□□□□□ -0.49
VMP1-211ENST00000591315 MOCS2O96007 188 aaPredicted RBP12□□□□□ -0.49
VMP1-211ENST00000591315 IGLV3-25P01717 112 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SP9P0CG40 484 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SKILP12757 684 aa12□□□□□ -0.49
VMP1-211ENST00000591315 UNGP13051 313 aaPredicted RBP12□□□□□ -0.49
VMP1-211ENST00000591315 DRD1P21728 446 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SLC6A4P31645 630 aa12□□□□□ -0.49
VMP1-211ENST00000591315 GABRB2P47870 512 aa12□□□□□ -0.49
VMP1-211ENST00000591315 PTPN5P54829 565 aa12□□□□□ -0.49
VMP1-211ENST00000591315 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
VMP1-211ENST00000591315 PTP4A2Q12974 167 aa12□□□□□ -0.49
VMP1-211ENST00000591315 LRRC32Q14392 662 aa12□□□□□ -0.49
VMP1-211ENST00000591315 RAB6CQ53S08 254 aa12□□□□□ -0.49
VMP1-211ENST00000591315 C2orf27AQ580R0 203 aa12□□□□□ -0.49
VMP1-211ENST00000591315 DGKKQ5KSL6 1271 aa12□□□□□ -0.49
VMP1-211ENST00000591315 FYB2Q5VWT5 728 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SMYD5Q6GMV2 418 aa12□□□□□ -0.49
VMP1-211ENST00000591315 C1orf228Q6PIY5 440 aa12□□□□□ -0.49
VMP1-211ENST00000591315 CPLX3Q8WVH0 158 aa12□□□□□ -0.49
VMP1-211ENST00000591315 GOLGA1Q92805 767 aa12□□□□□ -0.49
VMP1-211ENST00000591315 ATOH1Q92858 354 aaPredicted RBP12□□□□□ -0.49
VMP1-211ENST00000591315 C18orf8Q96DM3 657 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SLC39A13Q96H72 371 aa12□□□□□ -0.49
VMP1-211ENST00000591315 NOX5Q96PH1 765 aa12□□□□□ -0.49
VMP1-211ENST00000591315 PNKPQ96T60 521 aa12□□□□□ -0.49
VMP1-211ENST00000591315 AGPAT1Q99943 283 aa12□□□□□ -0.49
VMP1-211ENST00000591315 C11orf70Q9BRQ4 267 aa12□□□□□ -0.49
VMP1-211ENST00000591315 SYT11Q9BT88 431 aa12□□□□□ -0.49
VMP1-211ENST00000591315 DCLK3Q9C098 648 aa12□□□□□ -0.49
VMP1-211ENST00000591315 XPO4Q9C0E2 1151 aaKnown RBP12□□□□□ -0.49
VMP1-211ENST00000591315 RAB6CQ9H0N0 254 aa12□□□□□ -0.49
VMP1-211ENST00000591315 POPDC2Q9HBU9 364 aa12□□□□□ -0.49
VMP1-211ENST00000591315 DNAJC17Q9NVM6 304 aaKnown RBP12□□□□□ -0.49
VMP1-211ENST00000591315 TAS2R14Q9NYV8 317 aa12□□□□□ -0.49
VMP1-211ENST00000591315 MARK1Q9P0L2 795 aa12□□□□□ -0.49
VMP1-211ENST00000591315 CEP83Q9Y592 693 aa12□□□□□ -0.49
VMP1-211ENST00000591315 R4GN57 208 aa12□□□□□ -0.49
VMP1-211ENST00000591315 GFRA2O00451 464 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 CAPN9O14815 690 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 AP5Z1O43299 807 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 LAMTOR5O43504 91 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 HSF2BPO75031 334 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 KAT7O95251 611 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 CAVIN2O95810 425 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 CISD3P0C7P0 127 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 TDGF1P13385 188 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 HNRNPLP14866 589 aaKnown RBP eCLIP11.99□□□□□ -0.497e-9■■■■■ 28.7
VMP1-211ENST00000591315 PXNP49023 591 aaPredicted RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 HARS2P49590 506 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 ATXN1P54253 815 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 TPM4P67936 248 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 AMPD2Q01433 879 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 EIF4EBP2Q13542 120 aaPredicted RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 CLEC16AQ2KHT3 1053 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 FAM133BQ5BKY9 247 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 EFHC1Q5JVL4 640 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 SLC26A9Q7LBE3 791 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 FAM217AQ8IXS0 508 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 CCDC33Q8N5R6 958 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 RPLP0P6Q8NHW5 317 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 IPO4Q8TEX9 1081 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 ERLEC1Q96DZ1 483 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 NUCKS1Q9H1E3 243 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 FAM204AQ9H8W3 233 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 ANLNQ9NQW6 1124 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 PRMT8Q9NR22 394 aaPredicted RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 SEPT11Q9NVA2 429 aaKnown RBP11.99□□□□□ -0.49
VMP1-211ENST00000591315 DAAM1Q9Y4D1 1078 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 SNX10Q9Y5X0 201 aa11.99□□□□□ -0.49
VMP1-211ENST00000591315 FANCMQ8IYD8 2048 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms