RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SLC6A3Q01959 620 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 TNK2Q07912 1038 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 MLF2Q15773 248 aaPredicted RBP21■□□□□ 0.95
ATG4D-208ENST00000588667 EML3Q32P44 896 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 SLC44A4Q53GD3 710 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 TRIM68Q6AZZ1 485 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 RNF10Q8N5U6 811 aaKnown RBP21■□□□□ 0.95
ATG4D-208ENST00000588667 ATP2A3Q93084 1043 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 C1QTNF1Q9BXJ1 281 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 EBF3Q9H4W6 596 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 HPS4Q9NQG7 708 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 LSM7Q9UK45 103 aaKnown RBP21■□□□□ 0.95
ATG4D-208ENST00000588667 HBS1LQ9Y450 684 aaKnown RBP21■□□□□ 0.95
ATG4D-208ENST00000588667 CAPN9O14815 690 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 STC2O76061 302 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 MLLT6P55198 1093 aaPredicted RBP21■□□□□ 0.95
ATG4D-208ENST00000588667 PRKCQQ04759 706 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 ITPRIPL2Q3MIP1 535 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 IER5LQ5T953 404 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 MMS22LQ6ZRQ5 1243 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 HTR3DQ70Z44 454 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 XYLT1Q86Y38 959 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 OTUB2Q96DC9 234 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 SHDQ96IW2 340 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 WDR24Q96S15 920 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 PACSIN1Q9BY11 444 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 NAALADL1Q9UQQ1 740 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 DUSP10Q9Y6W6 482 aa21■□□□□ 0.95
ATG4D-208ENST00000588667 SLC12A8A0AV02 714 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 FAM170AA1A519 330 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 TMCO5BA8MYB1 307 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 GREM1O60565 184 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 GLULP15104 373 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 ARSAP15289 507 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 RUNX3Q13761 415 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 TAF5Q15542 800 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 PHF13Q86YI8 300 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-208ENST00000588667 CPA6Q8N4T0 437 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 WBP2Q969T9 261 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 PLD4Q96BZ4 506 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 MSANTD3Q96H12 275 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 SLC2A13Q96QE2 648 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 C11orf70Q9BRQ4 267 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 ISCUQ9H1K1 167 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 LINC00597Q9H2U6 94 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 C11orf16Q9NQ32 467 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 SFMBT1Q9UHJ3 866 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 PIAS3Q9Y6X2 628 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 COL4A3Q01955 1670 aa20.99■□□□□ 0.95
ATG4D-208ENST00000588667 SCAMP3O14828 347 aaKnown RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 RTN2O75298 545 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 NFATC1O95644 943 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 TMEM253P0C7T8 217 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 KPNA1P52294 538 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 GALCP54803 685 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 C2CD6Q53TS8 623 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 FAM102AQ5T9C2 384 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 PPP1R2P3Q6NXS1 205 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 TPRG1Q6ZUI0 275 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 SLC35F6Q8N357 371 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 TRIM58Q8NG06 486 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 DQX1Q8TE96 717 aaKnown RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 CTNNBL1Q8WYA6 563 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 ALS2CR12Q96Q35 445 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 DCLK3Q9C098 648 aa20.98■□□□□ 0.95
ATG4D-208ENST00000588667 C8orf33Q9H7E9 229 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-208ENST00000588667 ANKRD62A6NC57 917 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 MSI1O43347 362 aaKnown RBP20.97■□□□□ 0.95
ATG4D-208ENST00000588667 GPR37L1O60883 481 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 DAB1O75553 588 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 HMBSP08397 361 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 NAP1L1P55209 391 aaKnown RBP20.97■□□□□ 0.95
ATG4D-208ENST00000588667 STARD6P59095 220 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 NNTQ13423 1086 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 TRIP4Q15650 581 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-208ENST00000588667 IFI16Q16666 785 aaKnown RBP20.97■□□□□ 0.95
ATG4D-208ENST00000588667 DCAF6Q58WW2 860 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 SYPL2Q5VXT5 272 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 Q6ZNB5 142 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 BMP8AQ7Z5Y6 402 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 BBS7Q8IWZ6 715 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 SERPINB11Q96P15 392 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 MFSD1Q9H3U5 465 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 ECT2Q9H8V3 914 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 ADAM22Q9P0K1 906 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 MIA3Q5JRA6 1907 aa20.97■□□□□ 0.95
ATG4D-208ENST00000588667 A0A0A6YYK5 440 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 FAM86C2PA6NEL3 165 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 OTOL1A6NHN0 477 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 GRAP2O75791 330 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 FTLP02792 175 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 CALB1P05937 261 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 GSCP56915 257 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 C1QBPQ07021 282 aaKnown RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 PTP4A2Q12974 167 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 ACAD10Q6JQN1 1059 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 C1orf228Q6PIY5 440 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 MON1BQ7L1V2 547 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 DEFB106AQ8N104 65 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms