RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 IRF1P10914 325 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 IL9P15248 144 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 DESP17661 470 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 TFE3P19532 575 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 COMTP21964 271 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 KCNQ1P51787 676 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF143P52747 638 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 TBX4P57082 545 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ETF1P62495 437 aaKnown RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SLC7A9P82251 487 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 COG7P83436 770 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 DEUP1Q05D60 604 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ZNF252P-AS1Q0IIN9 211 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 CCDC14Q49A88 953 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SH3PXD2AQ5TCZ1 1133 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 MSANTD2Q6P1R3 559 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 TDRD5Q8NAT2 981 aaKnown RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SMARCD2Q92925 531 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 USP13Q92995 863 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 RNF34Q969K3 372 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ASB16Q96NS5 453 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SERPINB11Q96P15 392 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 TBCBQ99426 244 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 NPY6RQ99463 290 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 CNPY3Q9BT09 278 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 KLF16Q9BXK1 252 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SMOC2Q9H3U7 446 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 TDP1Q9NUW8 608 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 IP6K2Q9UHH9 426 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 CCL26Q9Y258 94 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
TOP3A-216ENST00000583804 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-216ENST00000583804 SPTBN5Q9NRC6 3674 aaKnown RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 C2CD4DB7Z1M9 353 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 LEFTY2O00292 366 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 SRGAP2O75044 1071 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 TCF4P15884 667 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 CXCR5P32302 372 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 VIPR2P41587 438 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 PTPN9P43378 593 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 KPNA1P52294 538 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 IFI16Q16666 785 aaKnown RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 PEX26Q7Z412 305 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 RNF10Q8N5U6 811 aaKnown RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 LRRC57Q8N9N7 239 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 SH3RF2Q8TEC5 729 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 FAM172AQ8WUF8 416 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 NAPGQ99747 312 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 ZFP14Q9HCL3 533 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 CFAP97Q9P2B7 532 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 ARHGAP26Q9UNA1 814 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
TOP3A-216ENST00000583804 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
TOP3A-216ENST00000583804 CTAGE9A4FU28 777 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ABCB7O75027 752 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 RNF8O76064 485 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 URI1O94763 535 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 F9P00740 461 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 RDXP35241 583 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TAS2R40P59535 323 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZXDBP98169 803 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PIGHQ14442 188 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 LLGL1Q15334 1064 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TRIP4Q15650 581 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZC3H12AQ5D1E8 599 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 SCYL2Q6P3W7 929 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PARM1Q6UWI2 310 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 STRADAQ7RTN6 431 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 FAM131BQ86XD5 332 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 CELF5Q8N6W0 485 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TRIM58Q8NG06 486 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 FNIP1Q8TF40 1166 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 KRT35Q92764 455 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 NT5C3BQ969T7 300 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 CAPZA3Q96KX2 299 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ADAM33Q9BZ11 813 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PIGVQ9NUD9 493 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 SMARCAL1Q9NZC9 954 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 EPS15L1Q9UBC2 864 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 TLR6Q9Y2C9 796 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ALG6Q9Y672 507 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 ANAPC1Q9H1A4 1944 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 HEPACAM2A8MVW5 462 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 IRAK2O43187 625 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 STC2O76061 302 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 MTA2O94776 668 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 PROSCO94903 275 aa11.38□□□□□ -0.59
TOP3A-216ENST00000583804 MOCS2O96007 188 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-216ENST00000583804 IGLV3-25P01717 112 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms