RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ZNF510Q9Y2H8 683 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
NPLOC4-209ENST00000572760 CHADO15335 359 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 LCA5LO95447 670 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 CYP1A2P05177 515 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC2A3P11169 496 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 PSMA2P25787 234 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 PTPN9P43378 593 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 KRT83P78385 493 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 RING1Q06587 406 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 FCHO2Q0JRZ9 810 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 C15orf59Q2T9L4 293 aaPredicted RBP15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 HTR3DQ70Z44 454 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 KIAA1328Q86T90 577 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 DENND1CQ8IV53 801 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 ATP6V0D2Q8N8Y2 350 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 CSGALNACT1Q8TDX6 532 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 OSCP1Q8WVF1 389 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 ARHGEF26Q96DR7 871 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 ZFYVE19Q96K21 471 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
NPLOC4-209ENST00000572760 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 ARHGAP6O43182 974 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 RNF8O76064 485 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 MOCS2O96007 188 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 CCR1P32246 355 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 SLC11A2P49281 568 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 ZNF143P52747 638 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 PFKPQ01813 784 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 CCDC14Q49A88 953 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 ZC3H12AQ5D1E8 599 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 TRNP1Q6NT89 227 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 BBS7Q8IWZ6 715 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 KIAA1958Q8N8K9 716 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 ZNF564Q8TBZ8 553 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 FAM172AQ8WUF8 416 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 WBP2Q969T9 261 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 OTUB2Q96DC9 234 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 FCRL2Q96LA5 508 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 CNPY3Q9BT09 278 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 WDCPQ9H6R7 721 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 CD320Q9NPF0 282 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 UVRAGQ9P2Y5 699 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
NPLOC4-209ENST00000572760 MYO1FO00160 1098 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 CCP110O43303 1012 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 NARSO43776 548 aaKnown RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 SLC34A2O95436 690 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 NFATC1O95644 943 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 IGLV3-25P01717 112 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 SRFP11831 508 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 TFE3P19532 575 aaPredicted RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 NOP2P46087 812 aaKnown RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 NR1H3Q13133 447 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 PPP2R5DQ14738 602 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 TRIM68Q6AZZ1 485 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 SCYL2Q6P3W7 929 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 STRADAQ7RTN6 431 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 RHOT2Q8IXI1 618 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 ACRBPQ8NEB7 543 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 ATP2A3Q93084 1043 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 NT5C3BQ969T7 300 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 PGAP3Q96FM1 320 aaPredicted RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 SLC39A13Q96H72 371 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 PDLIM2Q96JY6 352 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 DDX50Q9BQ39 737 aaKnown RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 LINC00597Q9H2U6 94 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 EBF3Q9H4W6 596 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 PIGVQ9NUD9 493 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 IP6K2Q9UHH9 426 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 MUTYHQ9UIF7 546 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
NPLOC4-209ENST00000572760 SPTBN5Q9NRC6 3674 aaKnown RBP15.08■□□□□ 0
NPLOC4-209ENST00000572760 ACSL4O60488 711 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 IGLV3-27P01718 113 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 KLKB1P03952 638 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 CHKAP35790 457 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 CXCR3P49682 368 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 OGDHQ02218 1023 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 MTA1Q13330 715 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 ARL13BQ3SXY8 428 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 BRMS1LQ5PSV4 323 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 FAM131BQ86XD5 332 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 UBALD2Q8IYN6 164 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 CPA6Q8N4T0 437 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 SLC35G2Q8TBE7 412 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 FNIP1Q8TF40 1166 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 RFFLQ8WZ73 363 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 BTN2A3PQ96KV6 586 aa15.07■□□□□ 0
NPLOC4-209ENST00000572760 NCAPGQ9BPX3 1015 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms