RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 KRT82Q9NSB4 513 aa17.04■□□□□ 0.32
CLK3-223ENST00000568488 ATMQ13315 3056 aa17.04■□□□□ 0.32
CLK3-223ENST00000568488 B8ZZF3 427 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
CLK3-223ENST00000568488 BEST1O76090 585 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 BCAT1P54687 386 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 MAP3K7CLP57077 242 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 ALCAMQ13740 583 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 LY6DQ14210 128 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 FBXL19Q6PCT2 694 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 Q6ZNB5 142 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 CCDC127Q96BQ5 260 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 DNAJC19Q96DA6 116 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 ACE2Q9BYF1 805 aaPredicted RBP17.03■□□□□ 0.32
CLK3-223ENST00000568488 SEMA4CQ9C0C4 833 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 KIF3AQ9Y496 699 aa17.03■□□□□ 0.32
CLK3-223ENST00000568488 NUMA1Q14980 2115 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 PAPSS1O43252 624 aaPredicted RBP17.02■□□□□ 0.32
CLK3-223ENST00000568488 TSPAN3O60637 253 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 PENKP01210 267 aaPredicted RBP17.02■□□□□ 0.32
CLK3-223ENST00000568488 RARGP13631 454 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 ACADVLP49748 655 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 MYL6P60660 151 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 RHDQ02161 417 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 C10orf120Q5SQS8 335 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 ARHGAP40Q5TG30 622 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 BROXQ5VW32 411 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 LURAP1LQ8IV03 231 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 FUKQ8N0W3 1084 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 TNIP3Q96KP6 325 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 ELF4Q99607 663 aaPredicted RBP17.02■□□□□ 0.32
CLK3-223ENST00000568488 SMOQ99835 787 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 CYLDQ9NQC7 956 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
CLK3-223ENST00000568488 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 CYP26A1O43174 497 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 STC2O76061 302 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 WISP1O95388 367 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 DNTTP04053 509 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 HMBSP08397 361 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 CCDC130P13994 396 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 GLDCP23378 1020 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 CHKAP35790 457 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 TBC1D25Q3MII6 688 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 RRAGBQ5VZM2 374 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 ACOT1Q86TX2 421 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 ZNF366Q8N895 744 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 SKA1Q96BD8 255 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 WBP1Q96G27 269 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 PIWIL1Q96J94 861 aaKnown RBP17.01■□□□□ 0.31
CLK3-223ENST00000568488 NMUR1Q9HB89 426 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 CPNE5Q9HCH3 593 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 CLEC4EQ9ULY5 219 aa17.01■□□□□ 0.31
CLK3-223ENST00000568488 A0A1W2PQH9 124 aa17■□□□□ 0.31
CLK3-223ENST00000568488 VILLO15195 856 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SLC28A2O43868 658 aa17■□□□□ 0.31
CLK3-223ENST00000568488 PHACTR2O75167 634 aa17■□□□□ 0.31
CLK3-223ENST00000568488 KLKB1P03952 638 aa17■□□□□ 0.31
CLK3-223ENST00000568488 CYBBP04839 570 aa17■□□□□ 0.31
CLK3-223ENST00000568488 TMPRSS3P57727 454 aa17■□□□□ 0.31
CLK3-223ENST00000568488 RACK1P63244 317 aaKnown RBP17■□□□□ 0.31
CLK3-223ENST00000568488 CAMK2GQ13555 558 aaPredicted RBP17■□□□□ 0.31
CLK3-223ENST00000568488 EIF4HQ15056 248 aaKnown RBP17■□□□□ 0.31
CLK3-223ENST00000568488 FNDC3BQ53EP0 1204 aaKnown RBP17■□□□□ 0.31
CLK3-223ENST00000568488 TMEM215Q68D42 235 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SCARA5Q6ZMJ2 495 aa17■□□□□ 0.31
CLK3-223ENST00000568488 ERICH1Q86X53 443 aa17■□□□□ 0.31
CLK3-223ENST00000568488 ZNF248Q8NDW4 579 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SLC2A14Q8TDB8 520 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SAP25Q8TEE9 199 aa17■□□□□ 0.31
CLK3-223ENST00000568488 GANCQ8TET4 914 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SLC6A18Q96N87 628 aa17■□□□□ 0.31
CLK3-223ENST00000568488 CGRRF1Q99675 332 aa17■□□□□ 0.31
CLK3-223ENST00000568488 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
CLK3-223ENST00000568488 CLCA2Q9UQC9 943 aa17■□□□□ 0.31
CLK3-223ENST00000568488 SCML2Q9UQR0 700 aa17■□□□□ 0.31
CLK3-223ENST00000568488 ZNF510Q9Y2H8 683 aa17■□□□□ 0.31
CLK3-223ENST00000568488 MYH10P35580 1976 aa17■□□□□ 0.31
CLK3-223ENST00000568488 TIMM44O43615 452 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 C6P13671 934 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 RPS14P62263 151 aaKnown RBP16.99■□□□□ 0.31
CLK3-223ENST00000568488 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
CLK3-223ENST00000568488 KIAA0895LQ68EN5 471 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 GPRIN1Q7Z2K8 1008 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 DDI1Q8WTU0 396 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 CYB5D2Q8WUJ1 264 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 SYAP1Q96A49 352 aaPredicted RBP16.99■□□□□ 0.31
CLK3-223ENST00000568488 ORAI3Q9BRQ5 295 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 SGK2Q9HBY8 427 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms