RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 UBXN1Q04323 297 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 DMC1Q14565 340 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 TAF3Q5VWG9 929 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 FYB2Q5VWT5 728 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 GRAMD4Q6IC98 578 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 TOGARAM2Q6ZUX3 1019 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 NOP9Q86U38 636 aaKnown RBP29.5■■■□□ 2.31
NME3-203ENST00000563367 CPXM2Q8N436 756 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 CCDC33Q8N5R6 958 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 TERB1Q8NA31 727 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 SUMF1Q8NBK3 374 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 ACDQ96AP0 544 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 ZDHHC4Q9NPG8 344 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 ERBB2P04626 1255 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 CISD3P0C7P0 127 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 TIE1P35590 1138 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 PXNP49023 591 aaPredicted RBP29.49■■■□□ 2.31
NME3-203ENST00000563367 ZNF165P49910 485 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 JAM2P57087 298 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 MRPS21P82921 87 aaKnown RBP29.49■■■□□ 2.31
NME3-203ENST00000563367 PTPN20Q4JDL3 420 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 BEND5Q7L4P6 421 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 HHIPQ96QV1 700 aa29.49■■■□□ 2.31
NME3-203ENST00000563367 GFPT2O94808 682 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 TBX4P57082 545 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 YWHAZP63104 245 aaKnown RBP29.48■■■□□ 2.31
NME3-203ENST00000563367 LONP2Q86WA8 852 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 ALLCQ8N6M5 410 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 ADAM32Q8TC27 787 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 PCMTD1Q96MG8 357 aaPredicted RBP29.48■■■□□ 2.31
NME3-203ENST00000563367 NOX5Q96PH1 765 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 ERGIC2Q96RQ1 377 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 POPDC2Q9HBU9 364 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 STOML2Q9UJZ1 356 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 FBXO10Q9UK96 956 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 HCN2Q9UL51 889 aa29.48■■■□□ 2.31
NME3-203ENST00000563367 PTPRZ1P23471 2315 aaPredicted RBP29.48■■■□□ 2.31
NME3-203ENST00000563367 FRYLO94915 3013 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 SMTNL1A8MU46 457 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 CDH5P33151 784 aaPredicted RBP29.47■■■□□ 2.31
NME3-203ENST00000563367 SRSF5Q13243 272 aaKnown RBP29.47■■■□□ 2.31
NME3-203ENST00000563367 PREPLQ4J6C6 727 aaPredicted RBP29.47■■■□□ 2.31
NME3-203ENST00000563367 C10orf76Q5T2E6 689 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 FAM183BPQ6ZVS7 135 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 TAC4Q86UU9 113 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 IL17RCQ8NAC3 791 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 EPS8L1Q8TE68 723 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 FCRL2Q96LA5 508 aaPredicted RBP29.47■■■□□ 2.31
NME3-203ENST00000563367 EPC1Q9H2F5 836 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 PDCL3Q9H2J4 239 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 CLEC4EQ9ULY5 219 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 MMP17Q9ULZ9 603 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 CEP83Q9Y592 693 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 GPR179Q6PRD1 2367 aa29.47■■■□□ 2.31
NME3-203ENST00000563367 OTOGLQ3ZCN5 2332 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 FAM170AA1A519 330 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 GFRA2O00451 464 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 CAPN9O14815 690 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 HRO43593 1189 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 KLF8O95600 359 aaPredicted RBP29.46■■■□□ 2.31
NME3-203ENST00000563367 SOX5P35711 763 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 DGKGP49619 791 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 PITX1P78337 314 aaPredicted RBP29.46■■■□□ 2.31
NME3-203ENST00000563367 RING1Q06587 406 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 IQCB1Q15051 598 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 ADGRF1Q5T601 910 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 WDR5BQ86VZ2 330 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 NEK11Q8NG66 645 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 TRIM62Q9BVG3 475 aa29.46■■■□□ 2.31
NME3-203ENST00000563367 SPAG17Q6Q759 2223 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 PRRT4C9JH25 899 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 SGK1O00141 431 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 TEX33O43247 280 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 TSPAN3O60637 253 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 LATS1O95835 1130 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 MMEP08473 750 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 HNRNPLP14866 589 aaKnown RBP eCLIP29.45■■■□□ 2.31
NME3-203ENST00000563367 NUGGCQ68CJ6 796 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 OR6B2Q6IFH4 312 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 OLFML1Q6UWY5 402 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 UNC45BQ8IWX7 931 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 CAMKK1Q8N5S9 505 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 TXNDC5Q8NBS9 432 aaKnown RBP29.45■■■□□ 2.31
NME3-203ENST00000563367 TMEM35BQ8NCS4 154 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 DDI1Q8WTU0 396 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 SLC20A1Q8WUM9 679 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 SLC39A13Q96H72 371 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 SERPINB11Q96P15 392 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 NOCTQ9UK39 431 aaKnown RBP29.45■■■□□ 2.31
NME3-203ENST00000563367 TLR6Q9Y2C9 796 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 DAAM1Q9Y4D1 1078 aa29.45■■■□□ 2.31
NME3-203ENST00000563367 EP300Q09472 2414 aaPredicted RBP29.44■■■□□ 2.3
NME3-203ENST00000563367 GOLGA6L7A0A1B0GV03 622 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 ADAM23O75077 832 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 GRAP2O75791 330 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 CYBBP04839 570 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 NNTQ13423 1086 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 EFHC1Q5JVL4 640 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 TMEM92Q6UXU6 159 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 DEFB106AQ8N104 65 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms