RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 OLFM3Q96PB7 478 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 KRT12Q99456 494 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 AP5M1Q9H0R1 490 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 DPH5Q9H2P9 285 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 SEPSECSQ9HD40 501 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 PRDM6Q9NQX0 595 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 EIF2B3Q9NR50 452 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 TAB2Q9NYJ8 693 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 USH1CQ9Y6N9 552 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 FPGT-TNNI3KV9GXZ4 949 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 MYH7P12883 1935 aa7.01□□□□□ -1.29
TSPAN3-209ENST00000560715 BCL9LQ86UU0 1499 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 A0A1W2PQC6 194 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TTLL8A6PVC2 850 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 HTRA2O43464 458 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 ECE2O60344 883 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MOCS3O95396 460 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF143P52747 638 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 ZC2HC1CQ53FD0 456 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 OLFML2BQ68BL8 750 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ZC3H18Q86VM9 953 aaKnown RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 FITM2Q8N6M3 262 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SUPT20HQ8NEM7 779 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 NAT14Q8WUY8 206 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MS4A14Q96JA4 679 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MAML3Q96JK9 1138 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ALPK1Q96QP1 1244 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TUBGCP5Q96RT8 1024 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 NAP1L3Q99457 506 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 SIKE1Q9BRV8 207 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TLR10Q9BXR5 811 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ZDHHC5Q9C0B5 715 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 LRMDAQ9H2I8 198 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ADAM7Q9H2U9 754 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 BOLA2Q9H3K6 86 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 DCLRE1BQ9H816 532 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TRPV4Q9HBA0 871 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 GPR108Q9NPR9 543 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PFDN4Q9NQP4 134 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ARHGEF38Q9NXL2 777 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 DNAJB9Q9UBS3 223 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 LRWD1Q9UFC0 647 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 AGTPBP1Q9UPW5 1226 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ARL2BPQ9Y2Y0 163 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 FLT1P17948 1338 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 KCNJ18B7U540 433 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 RAD51CO43502 376 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SGPL1O95470 568 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TRIM21P19474 475 aaKnown RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 PBLDP30039 288 aaPredicted RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 SLC7A1P30825 629 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 CIITAP33076 1130 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 EIF3BP55884 814 aaKnown RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 JAM2P57087 298 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 CYP27A1Q02318 531 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TFCP2Q12800 502 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PAK1Q13153 545 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MOGSQ13724 837 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 KCNJ12Q14500 433 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SPA17Q15506 151 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PITRM1Q5JRX3 1037 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 GPR139Q6DWJ6 353 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 GRAMD4Q6IC98 578 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SPATA24Q86W54 205 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MB21D1Q8N884 522 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 NOX5Q96PH1 765 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PRMT1Q99873 361 aaKnown RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 BRIP1Q9BX63 1249 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 OR10A4Q9H209 315 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 ZMAT4Q9H898 229 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SACM1LQ9NTJ5 587 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 TXLNGQ9NUQ3 528 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 INTS9Q9NV88 658 aaKnown RBP7□□□□□ -1.29
TSPAN3-209ENST00000560715 IL1RAPL1Q9NZN1 696 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 HESX1Q9UBX0 185 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SLC13A4Q9UKG4 626 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PCDHA6Q9UN73 950 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 PCDHA2Q9Y5H9 948 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 SPO11Q9Y5K1 396 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 NWD2Q9ULI1 1742 aa7□□□□□ -1.29
TSPAN3-209ENST00000560715 MYPNQ86TC9 1320 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MYH3P11055 1940 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 TMEM110-MUSTN1A8MSY1 372 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 KLHL41O60662 606 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ATP5HO75947 161 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 AFPP02771 609 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 LYNP07948 512 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 PABPC4LP0CB38 370 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MYL4P12829 197 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ETS2P15036 469 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 VAV1P15498 845 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 EPHA1P21709 976 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 CDK7P50613 346 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 RTP1P59025 263 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms