RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 WASH3PC4AMC7 463 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 H0Y626 953 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 NDUFS2O75306 463 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 TRIM16O95361 564 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 RALAP11233 206 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 KRT13P13646 458 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 CD58P19256 250 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 CHKAP35790 457 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 MFAP3P55082 362 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 COG7P83436 770 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 SLC14A1Q13336 389 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 HNRNPDQ14103 355 aaKnown RBP13.75□□□□□ -0.21
TPM1-220ENST00000559556 STARD3Q14849 445 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 FUT11Q495W5 492 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 GUF1Q8N442 669 aaKnown RBP13.75□□□□□ -0.21
TPM1-220ENST00000559556 OR2I1PQ8NGU4 316 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 ZCCHC14Q8WYQ9 949 aaKnown RBP13.75□□□□□ -0.21
TPM1-220ENST00000559556 ERLEC1Q96DZ1 483 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 FAXDC2Q96IV6 333 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 KLK13Q9UKR3 277 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 STON1Q9Y6Q2 735 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
TPM1-220ENST00000559556 FAM237AA0A1B0GTK4 181 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 CD6P30203 668 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 CORO1AP31146 461 aaKnown RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 GTF2H1P32780 548 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 FAM193AP78312 1265 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 DPYDQ12882 1025 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 GEN1Q17RS7 908 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 ZNF423Q2M1K9 1284 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 PLEKHG6Q3KR16 790 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 ZCWPW2Q504Y3 356 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 KIAA1324Q6UXG2 1013 aaKnown RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 FAM217AQ8IXS0 508 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 TTC39CQ8N584 583 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 PIWIL1Q96J94 861 aaKnown RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 WSB2Q9NYS7 404 aaPredicted RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 THAP10Q9P2Z0 257 aaPredicted RBP13.74□□□□□ -0.21
TPM1-220ENST00000559556 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
TPM1-220ENST00000559556 KCNJ18B7U540 433 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 GNSP15586 552 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
TPM1-220ENST00000559556 PSMC2P35998 433 aaKnown RBP13.73□□□□□ -0.21
TPM1-220ENST00000559556 IL12RB1P42701 662 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 SYKP43405 635 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 GRIK2Q13002 908 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
TPM1-220ENST00000559556 E2F5Q15329 346 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 KRT39Q6A163 491 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 ARHGAP18Q8N392 663 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 SLC4A11Q8NBS3 891 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 RBBP8NLQ8NC74 664 aaPredicted RBP13.73□□□□□ -0.21
TPM1-220ENST00000559556 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
TPM1-220ENST00000559556 SPATA32Q96LK8 384 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 ZDHHC5Q9C0B5 715 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 MMRN2Q9H8L6 949 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 TRPM6Q9BX84 2022 aa13.73□□□□□ -0.21
TPM1-220ENST00000559556 MEI4A8MW99 385 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 RDXP35241 583 aaKnown RBP13.72□□□□□ -0.21
TPM1-220ENST00000559556 MXI1P50539 228 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 TPMTP51580 245 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 NDUFA8P51970 172 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 RAD23BP54727 409 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 ZNF234Q14588 700 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 EDRF1Q3B7T1 1238 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 ZNF394Q53GI3 561 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 NAXDQ8IW45 347 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 FBXL13Q8NEE6 735 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 CADM4Q8NFZ8 388 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 SEMA4DQ92854 862 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 PLD4Q96BZ4 506 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 HEXIM2Q96MH2 286 aaKnown RBP13.72□□□□□ -0.21
TPM1-220ENST00000559556 ARID3AQ99856 593 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 SLC2A11Q9BYW1 496 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 CISHQ9NSE2 258 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 MARCH2Q9P0N8 246 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms