RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 MCM5P33992 734 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 TIAL1Q01085 375 aaKnown RBP eCLIP3.67□□□□□ -1.82
SRP54-207ENST00000555535 DEUP1Q05D60 604 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 ODF3L2Q3SX64 289 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 ZNF718Q3SXZ3 478 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 FAM76BQ5HYJ3 339 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 NUGGCQ68CJ6 796 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 RBM44Q6ZP01 1051 aaKnown RBP3.67□□□□□ -1.82
SRP54-207ENST00000555535 MICU3Q86XE3 530 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 UEVLDQ8IX04 471 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 METTL25Q8N6Q8 603 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 SLC35G2Q8TBE7 412 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 STK32BQ9NY57 414 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 PCDHAC2Q9Y5I4 1007 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 USP19O94966 1318 aa3.67□□□□□ -1.82
SRP54-207ENST00000555535 A0A1W2PPC1 479 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 H7C4K7 107 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 TBX3O15119 743 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 CD3EAPO15446 510 aaKnown RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 IGSF3O75054 1194 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 SP1P08047 785 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 EN2P19622 333 aaPredicted RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 JAK3P52333 1124 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 AGFG1P52594 562 aaKnown RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 TXNL4AP83876 142 aaKnown RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 CRYZQ08257 329 aaKnown RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 RAB32Q13637 225 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 ZNF672Q499Z4 452 aaPredicted RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 WBP2NLQ6ICG8 309 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 SWSAP1Q6NVH7 229 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 ADGRF4Q8IZF3 695 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 FAM71DQ8N9W8 422 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 LRGUKQ96M69 825 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 TAAR9Q96RI9 348 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 ZNF518BQ9C0D4 1074 aa3.66□□□□□ -1.82
SRP54-207ENST00000555535 A1CFQ9NQ94 594 aaKnown RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 NKX1-2Q9UD57 310 aaPredicted RBP3.66□□□□□ -1.82
SRP54-207ENST00000555535 KIR2DS5A0A0G2JLQ3 304 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 KIR2DS3K7RE56 304 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 EXOC5O00471 708 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 SLC16A5O15375 505 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 PHGDHO43175 533 aaKnown RBP3.65□□□□□ -1.83
SRP54-207ENST00000555535 RGS10O43665 173 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 UGDHO60701 494 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 RASAL1O95294 804 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 ADRA1DP25100 572 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 ITGA8P53708 1063 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 GPC5P78333 572 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 RBM39Q14498 530 aaKnown RBP3.65□□□□□ -1.83
SRP54-207ENST00000555535 ST3GAL2Q16842 350 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 CACHD1Q5VU97 1274 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 OVCH2Q7RTZ1 564 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 TPH2Q8IWU9 490 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 CHPFQ8IZ52 775 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 ZBTB34Q8NCN2 500 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 CENPIQ92674 756 aaPredicted RBP3.65□□□□□ -1.83
SRP54-207ENST00000555535 SPSB4Q96A44 273 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 VPS50Q96JG6 964 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 HTATIP2Q9BUP3 242 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 USP29Q9HBJ7 922 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 MLXIPLQ9NP71 852 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 SEMA5BQ9P283 1151 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 CPNE7Q9UBL6 633 aa3.65□□□□□ -1.83
SRP54-207ENST00000555535 CLEC18AA5D8T8 446 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 RRP9O43818 475 aaKnown RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 SLC7A1P30825 629 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 PTDSS1P48651 473 aaKnown RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 NOVP48745 357 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 GATMP50440 423 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 COASYQ13057 564 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 MTA1Q13330 715 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 INSCQ1MX18 579 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 SMTNL2Q2TAL5 461 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 FAM83HQ6ZRV2 1179 aaPredicted RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 MUC20Q8N307 709 aaPredicted RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 CLEC18CQ8NCF0 446 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 AIFM3Q96NN9 605 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 PPP1R9BQ96SB3 815 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 WDR83Q9BRX9 315 aaKnown RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 CINPQ9BW66 212 aaPredicted RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 RTFDC1Q9BY42 306 aaPredicted RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 SPRY4Q9C004 299 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 DCLK3Q9C098 648 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 MOV10Q9HCE1 1003 aaKnown RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 AGO4Q9HCK5 861 aaKnown RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 NMRK2Q9NPI5 230 aa3.64□□□□□ -1.83
SRP54-207ENST00000555535 PNMA8BQ9ULN7 279 aaPredicted RBP3.64□□□□□ -1.83
SRP54-207ENST00000555535 LOC102723971A0A1B0GUV8 181 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 TRIM43BA6NCK2 446 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 PRR23AA6NEV1 266 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 PYCARD-AS1I3L0S3 204 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 KCNQ3O43525 872 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 TUSC2O75896 110 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 IFNA2P01563 188 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 PARP1P09874 1014 aaKnown RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 CT47B1P0C2W7 299 aaPredicted RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 CPA1P15085 419 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 HSPA6P17066 643 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms