RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ARHGEF38Q9NXL2 777 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 COX16Q9P0S2 106 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 RCOR3Q9P2K3 495 aaPredicted RBP18.07■□□□□ 0.48
LETMD1-220ENST00000549686 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 FZD10Q9ULW2 581 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 AP4E1Q9UPM8 1137 aa18.07■□□□□ 0.48
LETMD1-220ENST00000549686 GREB1Q4ZG55 1949 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 LRRD1A4D1F6 860 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 PGRMC1O00264 195 aaKnown RBP18.06■□□□□ 0.48
LETMD1-220ENST00000549686 COCHO43405 550 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 SRGAP2O75044 1071 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 OLFM2O95897 454 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 RHOP08100 348 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 PYGMP11217 842 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 KDELR1P24390 212 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 ATXN1P54253 815 aaKnown RBP18.06■□□□□ 0.48
LETMD1-220ENST00000549686 HYAL1Q12794 435 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 KRT81Q14533 505 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 SMTNL2Q2TAL5 461 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 KCNT1Q5JUK3 1230 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF697Q5TEC3 545 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 TXNRD3NBQ6F5E7 133 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 GAREM2Q75VX8 874 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 CCDC50Q8IVM0 306 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 UNC45BQ8IWX7 931 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 HS6ST3Q8IZP7 471 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 CEP112Q8N8E3 955 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 PLD4Q96BZ4 506 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF707Q96C28 371 aaPredicted RBP18.06■□□□□ 0.48
LETMD1-220ENST00000549686 TKTL2Q9H0I9 626 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 PRDM12Q9H4Q4 367 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
LETMD1-220ENST00000549686 NUDT5Q9UKK9 219 aa18.06■□□□□ 0.48
LETMD1-220ENST00000549686 TRAV19A0A0A6YYK7 116 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 SLC12A8A0AV02 714 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 KCNU1A8MYU2 1149 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 TBX18O95935 607 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 IGLV3-27P01718 113 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 HTR7P34969 479 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 ARSEP51690 589 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 CDH6P55285 790 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 TAZQ16635 292 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 RAB6CQ53S08 254 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 TFDP3Q5H9I0 405 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 SPOCD1Q6ZMY3 1216 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 CCDC185Q8N715 623 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 ATP6V0D2Q8N8Y2 350 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 VN1R2Q8NFZ6 395 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 SMG7Q92540 1137 aaKnown RBP18.05■□□□□ 0.48
LETMD1-220ENST00000549686 RAPGEF5Q92565 580 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 FCRL2Q96LA5 508 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF670Q9BS34 389 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 RAB6CQ9H0N0 254 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 OSBPL2Q9H1P3 480 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-220ENST00000549686 IGFLR1Q9H665 355 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 LAMA2P24043 3122 aaKnown RBP18.05■□□□□ 0.48
LETMD1-220ENST00000549686 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 MYO16Q9Y6X6 1858 aa18.05■□□□□ 0.48
LETMD1-220ENST00000549686 TNRC18O15417 2968 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-220ENST00000549686 MTCL1Q9Y4B5 1905 aaKnown RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 A0A1W2PRU2 124 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF185O15231 689 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 MSI1O43347 362 aaKnown RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 HDCP19113 662 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ARL4AP40617 200 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 SLC7A9P82251 487 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF211Q13398 564 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ATP13A4Q4VNC1 1196 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ZC3H12AQ5D1E8 599 aaKnown RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 ZNF572Q7Z3I7 529 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 SLC13A5Q86YT5 568 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 AZIN2Q96A70 460 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 RNF25Q96BH1 459 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 BTN2A3PQ96KV6 586 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 CAPZA3Q96KX2 299 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 OSBPL8Q9BZF1 889 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 DHX35Q9H5Z1 703 aaKnown RBP18.04■□□□□ 0.48
LETMD1-220ENST00000549686 PCDH18Q9HCL0 1135 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 TRPC7Q9HCX4 862 aa18.04■□□□□ 0.48
LETMD1-220ENST00000549686 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 C2orf78A6NCI8 922 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 C3orf70A6NLC5 250 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 H3BRJ5 948 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 TJP3O95049 919 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 LATS1O95835 1130 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 FGGP02679 453 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 L1CAMP32004 1257 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 CDKN2BP42772 138 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 HCAR3P49019 387 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 HARS2P49590 506 aaKnown RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 NRG1Q02297 640 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-220ENST00000549686 ITIH3Q06033 890 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 ADAM15Q13444 863 aa18.03■□□□□ 0.48
LETMD1-220ENST00000549686 TFDP2Q14188 446 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms