RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ACOT1Q86TX2 421 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 CACTIN-AS1Q8N1I8 211 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 OR2T3Q8NH03 318 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 SLC2A14Q8TDB8 520 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 CCDC127Q96BQ5 260 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
RTN3-214ENST00000545432 C6orf106Q9H6K1 298 aaPredicted RBP15.49■□□□□ 0.07
RTN3-214ENST00000545432 CLIC5Q9NZA1 410 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 CLEC4EQ9ULY5 219 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 PCDHA5Q9Y5H7 936 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 USP3Q9Y6I4 520 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 A0A1W2PQH9 124 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 PLK4O00444 970 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
RTN3-214ENST00000545432 VNN1O95497 513 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ACADMP11310 421 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 PRKCHP24723 683 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 STAT6P42226 847 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 PSEN1P49768 467 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CCT8P50990 548 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 KIF11P52732 1056 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ZBTB16Q05516 673 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 TEAD4Q15561 434 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 E2F4Q16254 413 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ZNF667Q5HYK9 610 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 KCNT1Q5JUK3 1230 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 PCSK4Q6UW60 755 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CLEC20AQ6ZU45 233 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ANKS1BQ7Z6G8 1248 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CPXM2Q8N436 756 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ZNF843Q8N446 348 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 ENGASEQ8NFI3 743 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 SNIP1Q8TAD8 396 aaKnown RBP15.48■□□□□ 0.07
RTN3-214ENST00000545432 PIP4K2CQ8TBX8 421 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 DCLK3Q9C098 648 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 NRSN2Q9GZP1 204 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 TNMDQ9H2S6 317 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 TMEM245Q9H330 911 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
RTN3-214ENST00000545432 SMC3Q9UQE7 1217 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 RAI2Q9Y5P3 530 aa15.48■□□□□ 0.07
RTN3-214ENST00000545432 A0A1B0GTQ1 180 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 MDM4O15151 490 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 CYP26A1O43174 497 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 CCDC130P13994 396 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 CD27P26842 260 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 COG7P83436 770 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 KIAA0907Q7Z7F0 614 aaPredicted RBP15.47■□□□□ 0.07
RTN3-214ENST00000545432 C12orf29Q8N999 325 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 PARD3BQ8TEW8 1205 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 TSC1Q92574 1164 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 BIRC7Q96CA5 298 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 NXPE2Q96DL1 559 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 PANK2Q9BZ23 570 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 FBRSQ9HAH7 460 aa15.47■□□□□ 0.07
RTN3-214ENST00000545432 COL5A1P20908 1838 aaPredicted RBP15.47■□□□□ 0.07
RTN3-214ENST00000545432 UBE4BO95155 1302 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 GOLGA8CPA6NN73 597 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 KCNK3O14649 394 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 VILLO15195 856 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 CLIC2O15247 247 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 EPHX1P07099 455 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 NDST1P52848 882 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 NCOA4Q13772 614 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 SLC39A14Q15043 492 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 ZNF699Q32M78 642 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 ZNF605Q86T29 641 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 TADA2BQ86TJ2 420 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 TAF4BQ92750 862 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 BHMTQ93088 406 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 LHX5Q9H2C1 402 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 HMGXB4Q9UGU5 601 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 NUDT5Q9UKK9 219 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 AGO1Q9UL18 857 aaKnown RBP15.46■□□□□ 0.07
RTN3-214ENST00000545432 NAV2Q8IVL1 2488 aa15.46■□□□□ 0.07
RTN3-214ENST00000545432 COL6A6A6NMZ7 2263 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 TEX51A0A1B0GUA7 166 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 LRRIQ3A6PVS8 624 aaPredicted RBP15.45■□□□□ 0.06
RTN3-214ENST00000545432 RPN1P04843 607 aaKnown RBP15.45■□□□□ 0.06
RTN3-214ENST00000545432 FAM200BP0CF97 657 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 SHBQ15464 509 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 C10orf120Q5SQS8 335 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
RTN3-214ENST00000545432 DCBLD2Q96PD2 775 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 CDK5RAP1Q96SZ6 601 aaKnown RBP15.45■□□□□ 0.06
RTN3-214ENST00000545432 BTBD1Q9H0C5 482 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 SGK2Q9HBY8 427 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 FTSJ1Q9UET6 329 aa15.45■□□□□ 0.06
RTN3-214ENST00000545432 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
RTN3-214ENST00000545432 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
RTN3-214ENST00000545432 ENC1O14682 589 aa15.44■□□□□ 0.06
RTN3-214ENST00000545432 PHACTR2O75167 634 aa15.44■□□□□ 0.06
RTN3-214ENST00000545432 SEMA4FO95754 770 aa15.44■□□□□ 0.06
RTN3-214ENST00000545432 IGHV4-34P06331 123 aa15.44■□□□□ 0.06
RTN3-214ENST00000545432 JUPP14923 745 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms