RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 DPP7Q9UHL4 492 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 VPS51Q9UID3 782 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 FAM205CA6NFA0 338 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 SERPINH1P50454 418 aaKnown RBP20.54■□□□□ 0.88
BPTF-208ENST00000544778 FMR1Q06787 632 aaKnown RBP eCLIP20.54■□□□□ 0.883e-6■■■□□ 17.7
BPTF-208ENST00000544778 COL26A1Q96A83 441 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 CATSPER2Q96P56 530 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PDPK2PQ6A1A2 396 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 SCUBE1Q8IWY4 988 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 SIRT2Q8IXJ6 389 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 THAP2Q9H0W7 228 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PACS1Q6VY07 963 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PROSER1Q86XN7 944 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PGLYRP2Q96PD5 576 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 CDK5RAP1Q96SZ6 601 aaKnown RBP20.54■□□□□ 0.88
BPTF-208ENST00000544778 TMEM79Q9BSE2 394 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 TMEM39AQ9NV64 488 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 MOXD2PA6NHM9 499 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 IFNA16P05015 189 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 BCAT1P54687 386 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 ZCWPW2Q504Y3 356 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 CCSER1Q9C0I3 900 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 AP4E1Q9UPM8 1137 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 DNAJC16Q9Y2G8 782 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 CLCN3P51790 818 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 RIPOR1Q6ZS17 1223 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 ZNF671Q8TAW3 534 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 ZIM3Q96PE6 472 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PHF20Q9BVI0 1012 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 VAV3Q9UKW4 847 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 PDE5AO76074 875 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 CGRRF1Q99675 332 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 SAE1Q9UBE0 346 aaPredicted RBP20.54■□□□□ 0.88
BPTF-208ENST00000544778 LYVE1Q9Y5Y7 322 aa20.54■□□□□ 0.88
BPTF-208ENST00000544778 ZCCHC18P0CG32 403 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 PTSQ03393 145 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 TERB1Q8NA31 727 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 C3orf20Q8ND61 904 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 PIK3R5Q8WYR1 880 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 OMA1Q96E52 524 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 OMDQ99983 421 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 CCDC154A6NI56 674 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 LHX1P48742 406 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 IRX1P78414 480 aaPredicted RBP20.53■□□□□ 0.88
BPTF-208ENST00000544778 CAMK1Q14012 370 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 SETMARQ53H47 684 aaPredicted RBP20.53■□□□□ 0.88
BPTF-208ENST00000544778 C16orf59Q7L2K0 433 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 FNDC5Q8NAU1 212 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 RAB23Q9ULC3 237 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 VANGL2Q9ULK5 521 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 KANSL1LA0AUZ9 987 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 RHOBTB3O94955 611 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 EVA1BQ9NVM1 165 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 SNX6Q9UNH7 406 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 A0A087WZ62 844 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 TBX3O15119 743 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 TPBGLP0DKB5 382 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 PKN1Q16512 942 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 ATG4AQ8WYN0 398 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 OR1E1P30953 314 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 SKIV2L2P42285 1042 aaKnown RBP20.53■□□□□ 0.88
BPTF-208ENST00000544778 SRSF11Q05519 484 aaKnown RBP20.53■□□□□ 0.88
BPTF-208ENST00000544778 CBFBQ13951 182 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 PMF1Q6P1K2 205 aa20.53■□□□□ 0.88
BPTF-208ENST00000544778 RAG1P15918 1043 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 FOXO4P98177 505 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 ENTPD4Q9Y227 616 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 SEC22BO75396 215 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 JCHAINP01591 159 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 PDK2Q15119 407 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 ZNF280DQ6N043 979 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 KLHL4Q9C0H6 718 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 SMPD4Q9NXE4 827 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 RBM7Q9Y580 266 aaKnown RBP20.52■□□□□ 0.88
BPTF-208ENST00000544778 RAD51BO15315 384 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 TSPAN19P0C672 248 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 PSMD7P51665 324 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 OASLQ15646 514 aaKnown RBP20.52■□□□□ 0.88
BPTF-208ENST00000544778 FAM98BQ52LJ0 330 aaKnown RBP20.52■□□□□ 0.88
BPTF-208ENST00000544778 RPTNQ6XPR3 784 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 GLT6D1Q7Z4J2 308 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 EDEM1Q92611 657 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 C1QTNF7Q9BXJ2 289 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 SSU72P8A0A1W2PR75 194 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 ILDR2Q71H61 639 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 SLC22A9Q8IVM8 553 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 AMD1P17707 334 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 GARTP22102 1010 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 ALG11Q2TAA5 492 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 TBCELQ5QJ74 424 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 OTUD3Q5T2D3 398 aaPredicted RBP20.52■□□□□ 0.88
BPTF-208ENST00000544778 BRSK2Q8IWQ3 736 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 CCDC185Q8N715 623 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 EPS8L3Q8TE67 593 aaKnown RBP20.52■□□□□ 0.88
BPTF-208ENST00000544778 MIEF2Q96C03 454 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 TBCDQ9BTW9 1192 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms