RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 MYO6Q9UM54 1294 aa22.7■■□□□ 1.22
OTUB1-212ENST00000543988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.69■■□□□ 1.22
OTUB1-212ENST00000543988 DAB1O75553 588 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 KAT7O95251 611 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 IGLV3-25P01717 112 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 PBX1P40424 430 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 GABRB2P47870 512 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 UBASH3AP57075 661 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 RING1Q06587 406 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 NNTQ13423 1086 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 FBXO43Q4G163 708 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 DCAF6Q58WW2 860 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 TRIM72Q6ZMU5 477 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 MAMSTRQ6ZN01 415 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 XYLT1Q86Y38 959 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 ZDHHC17Q8IUH5 632 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 DEFB106AQ8N104 65 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 CPXM2Q8N436 756 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 ATOH1Q92858 354 aaPredicted RBP22.69■■□□□ 1.22
OTUB1-212ENST00000543988 C18orf8Q96DM3 657 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 PLK2Q9NYY3 685 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 IFNKQ9P0W0 207 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 FBXO4Q9UKT5 387 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 TLR6Q9Y2C9 796 aa22.69■■□□□ 1.22
OTUB1-212ENST00000543988 ANTXRLA6NF34 631 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 LRRC53A6NM62 1247 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 K7EQS6 105 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 TRIM24O15164 1050 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 IRAK2O43187 625 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 LATS1O95835 1130 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 TRUB2O95900 331 aaKnown RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 PENKP01210 267 aaPredicted RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 SP9P0CG40 484 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 FERP16591 822 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 CHKAP35790 457 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 CCR3P51677 355 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 CSTF1Q05048 431 aaKnown RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 FYB2Q5VWT5 728 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 E4F1Q66K89 784 aaPredicted RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 NUGGCQ68CJ6 796 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 TSSK4Q6SA08 328 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 MMS22LQ6ZRQ5 1243 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 MSANTD4Q8NCY6 345 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 ZNF397Q8NF99 534 aaPredicted RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 SLC39A13Q96H72 371 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 IRF2BPLQ9H1B7 796 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 FAM204AQ9H8W3 233 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 DNAJC17Q9NVM6 304 aaKnown RBP22.68■■□□□ 1.22
OTUB1-212ENST00000543988 DEC1Q9P2X7 70 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 STOML2Q9UJZ1 356 aa22.68■■□□□ 1.22
OTUB1-212ENST00000543988 GFRA2O00451 464 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 APODP05090 189 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 GRIA2P42262 883 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 CDK17Q00537 523 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 FAM102AQ5T9C2 384 aaPredicted RBP22.67■■□□□ 1.22
OTUB1-212ENST00000543988 GRAMD4Q6IC98 578 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 IRF2BP2Q7Z5L9 587 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 RNF214Q8ND24 703 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 SLC30A5Q8TAD4 765 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 AGPAT1Q99943 283 aa22.67■■□□□ 1.22
OTUB1-212ENST00000543988 CACNA1IQ9P0X4 2223 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 GOLGA8SH3BPF8 625 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 CHRM1P11229 460 aaPredicted RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 TDGF1P13385 188 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 MMP8P22894 467 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 SCNN1AP37088 669 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 CXCL12P48061 93 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 SEC13P55735 322 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 ASIC2Q16515 512 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 CLEC16AQ2KHT3 1053 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 ZC3H12AQ5D1E8 599 aaKnown RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 ADGRF1Q5T601 910 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 OTUD1Q5VV17 481 aaPredicted RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 UNC45BQ8IWX7 931 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 TERB1Q8NA31 727 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 RPLP0P6Q8NHW5 317 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 OLIG1Q8TAK6 271 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 XPO6Q96QU8 1125 aaKnown RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 C11orf70Q9BRQ4 267 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 SEPT11Q9NVA2 429 aaKnown RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 POLR3BQ9NW08 1133 aaPredicted RBP22.66■■□□□ 1.22
OTUB1-212ENST00000543988 DDIT4Q9NX09 232 aa22.66■■□□□ 1.22
OTUB1-212ENST00000543988 CHURC1-FNTBB4DL54 471 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 TSPAN3O60637 253 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 MOCS2O96007 188 aaPredicted RBP22.65■■□□□ 1.22
OTUB1-212ENST00000543988 CCDC172P0C7W6 258 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 UNGP13051 313 aaPredicted RBP22.65■■□□□ 1.22
OTUB1-212ENST00000543988 PLA2G5P39877 138 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 SLC11A2P49281 568 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 ZNF445P59923 1031 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 CENPCQ03188 943 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 FAM133BQ5BKY9 247 aaKnown RBP22.65■■□□□ 1.22
OTUB1-212ENST00000543988 FIGNQ5HY92 759 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 NADSYN1Q6IA69 706 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 USP33Q8TEY7 942 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 PHOX2BQ99453 314 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 SYT11Q9BT88 431 aa22.65■■□□□ 1.22
OTUB1-212ENST00000543988 SYNJ2BP-COX16A0A087WUM0 186 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 A0A0A0MRY4 1105 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 GOLGA6L7A0A1B0GV03 622 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms