RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 CSH1P0DML2 217 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CSH2P0DML3 217 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SP100P23497 879 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 HIRAP54198 1017 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 RPL26P61254 145 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 SATB1Q01826 763 aa7□□□□□ -1.29
NKRF-204ENST00000542113 FSTL1Q12841 308 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ORC1Q13415 861 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MTM1Q13496 603 aa7□□□□□ -1.29
NKRF-204ENST00000542113 HSDL1Q3SXM5 330 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PPP6R3Q5H9R7 873 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 FSCBQ5H9T9 825 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ARHGAP17Q68EM7 881 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SCARA3Q6AZY7 606 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SLC30A9Q6PML9 568 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CDHR3Q6ZTQ4 885 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SLC26A9Q7LBE3 791 aa7□□□□□ -1.29
NKRF-204ENST00000542113 TTC7BQ86TV6 843 aa7□□□□□ -1.29
NKRF-204ENST00000542113 LRRC52Q8N7C0 313 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CXorf38Q8TB03 319 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PIP4K2CQ8TBX8 421 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SPATA13Q96N96 652 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CCDC106Q9BWC9 280 aa7□□□□□ -1.29
NKRF-204ENST00000542113 DNAJC28Q9NX36 388 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MOCS1Q9NZB8 636 aa7□□□□□ -1.29
NKRF-204ENST00000542113 DLGAP2Q9P1A6 1054 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BTBD7Q9P203 1132 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ARMCX1Q9P291 453 aa7□□□□□ -1.29
NKRF-204ENST00000542113 GTF2IRD1Q9UHL9 959 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SSX2IPQ9Y2D8 614 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CCDC195A0A1B0GUA6 201 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CXorf49A8MYA2 514 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 FZD9O00144 591 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ANPEPP15144 967 aa7□□□□□ -1.29
NKRF-204ENST00000542113 IL4RP24394 825 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PRDX6P30041 224 aa7□□□□□ -1.29
NKRF-204ENST00000542113 COPAP53621 1224 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BCAT1P54687 386 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BMPR2Q13873 1038 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CCDC153Q494R4 210 aa7□□□□□ -1.29
NKRF-204ENST00000542113 FASTKD1Q53R41 847 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 FAXCQ5TGI0 409 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MROH9Q5TGP6 573 aa7□□□□□ -1.29
NKRF-204ENST00000542113 LRRC8BQ6P9F7 803 aa7□□□□□ -1.29
NKRF-204ENST00000542113 RIPOR1Q6ZS17 1223 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PDZD4Q76G19 769 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 STRADAQ7RTN6 431 aa7□□□□□ -1.29
NKRF-204ENST00000542113 TRIM50Q86XT4 487 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MYLK4Q86YV6 388 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 HTR3CQ8WXA8 447 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
NKRF-204ENST00000542113 DHX35Q9H5Z1 703 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BCAP29Q9UHQ4 241 aa7□□□□□ -1.29
NKRF-204ENST00000542113 AP4E1Q9UPM8 1137 aa7□□□□□ -1.29
NKRF-204ENST00000542113 AKT3Q9Y243 479 aa7□□□□□ -1.29
NKRF-204ENST00000542113 NFKBIEO00221 500 aa7□□□□□ -1.29
NKRF-204ENST00000542113 SKAP2O75563 359 aaPredicted RBP7□□□□□ -1.29
NKRF-204ENST00000542113 PEX19P40855 299 aa7□□□□□ -1.29
NKRF-204ENST00000542113 GRM5P41594 1212 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ALDH18A1P54886 795 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 CDC42EP1Q00587 391 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PDE1BQ01064 536 aa7□□□□□ -1.29
NKRF-204ENST00000542113 KDSRQ06136 332 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BST2Q10589 180 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 LAMC2Q13753 1193 aa7□□□□□ -1.29
NKRF-204ENST00000542113 RBBP5Q15291 538 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 SLC10A6Q3KNW5 377 aa7□□□□□ -1.29
NKRF-204ENST00000542113 EFHC1Q5JVL4 640 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CASC4Q6P4E1 433 aa7□□□□□ -1.29
NKRF-204ENST00000542113 EEPD1Q7L9B9 569 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MFN1Q8IWA4 741 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CCDC33Q8N5R6 958 aa7□□□□□ -1.29
NKRF-204ENST00000542113 BEST2Q8NFU1 509 aa7□□□□□ -1.29
NKRF-204ENST00000542113 DTX3LQ8TDB6 740 aa7□□□□□ -1.29
NKRF-204ENST00000542113 WDR60Q8WVS4 1066 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PPP2R3CQ969Q6 453 aa7□□□□□ -1.29
NKRF-204ENST00000542113 KIF12Q96FN5 646 aa7□□□□□ -1.29
NKRF-204ENST00000542113 GBP5Q96PP8 586 aa7□□□□□ -1.29
NKRF-204ENST00000542113 THTPAQ9BU02 230 aa7□□□□□ -1.29
NKRF-204ENST00000542113 MECRQ9BV79 373 aa7□□□□□ -1.29
NKRF-204ENST00000542113 ARHGEF4Q9NR80 690 aa7□□□□□ -1.29
NKRF-204ENST00000542113 GPATCH2LQ9NWQ4 482 aa7□□□□□ -1.29
NKRF-204ENST00000542113 DDX43Q9NXZ2 648 aaKnown RBP7□□□□□ -1.29
NKRF-204ENST00000542113 PLA2G4CQ9UP65 541 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CDY2AQ9Y6F7 541 aa7□□□□□ -1.29
NKRF-204ENST00000542113 CDY1Q9Y6F8 540 aa7□□□□□ -1.29
NKRF-204ENST00000542113 NUMBLQ9Y6R0 609 aa7□□□□□ -1.29
NKRF-204ENST00000542113 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.99□□□□□ -1.29
NKRF-204ENST00000542113 KPNA7A9QM74 516 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 IRF6O14896 467 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 XPOTO43592 962 aaKnown RBP6.99□□□□□ -1.29
NKRF-204ENST00000542113 GRAP2O75791 330 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 POLBP06746 335 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 TXNP10599 105 aaKnown RBP6.99□□□□□ -1.29
NKRF-204ENST00000542113 CDC25CP30307 473 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 SLC1A6P48664 564 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 RGS7P49802 495 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 HK2P52789 917 aa6.99□□□□□ -1.29
NKRF-204ENST00000542113 EN1Q05925 392 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms