RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TSPY1Q01534 308 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC6A3Q01959 620 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 TNP2Q05952 138 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 NME3Q13232 169 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 TRADDQ15628 312 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 DCAF6Q58WW2 860 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 C1orf229Q6ZS94 237 aaPredicted RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM110Q86TL2 294 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SUGP1Q8IWZ8 645 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SIX6OS1Q8N1H7 587 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 THEM5Q8N1Q8 247 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 TTC39CQ8N584 583 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 COLGALT1Q8NBJ5 622 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 GIPC2Q8TF65 315 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 RAPGEF5Q92565 580 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 GOLGA1Q92805 767 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SMARCD1Q96GM5 515 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 PNKPQ96T60 521 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 COLEC11Q9BWP8 271 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 MRPL9Q9BYD2 267 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM107BQ9H098 131 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 DDX47Q9H0S4 455 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 C10orf88Q9H8K7 445 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 LRRC4Q9HBW1 653 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM59LQ9UK28 342 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 KIAA1257Q9ULG3 409 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 STRIP2Q9ULQ0 834 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 ESYT3A0FGR9 886 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CTAGE15A4D2H0 777 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM189-UBE2V1I3L0A0 370 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 OAZ2O95190 189 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 GJB5O95377 273 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PARNO95453 639 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 KRT1P04264 644 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 FYNP06241 537 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TUBBP07437 444 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CTAGE8P0CG41 777 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SETSIPP0DME0 302 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TCP1P17987 556 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MIPP30301 263 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 RFC2P35250 354 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC5A3P53794 718 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 DUSP4Q13115 394 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SNX1Q13596 522 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TUBB2AQ13885 445 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF268Q14587 947 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 STILQ15468 1287 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CA9Q16790 459 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 LONRF2Q1L5Z9 754 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MGAT5BQ3V5L5 792 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 OTUD1Q5VV17 481 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CYP4V2Q6ZWL3 525 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 RSRC2Q7L4I2 434 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 BHLHA9Q7RTU4 235 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PRUNE1Q86TP1 453 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CTAGE6Q86UF2 777 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM131BQ86XD5 332 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CTAGE4Q8IX94 777 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 C10orf67Q8IYJ2 551 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 DEFB106AQ8N104 65 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PYROXD2Q8N2H3 581 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC185Q8N715 623 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SPATA4Q8NEY3 305 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM172AQ8WUF8 416 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 HNRNPLLQ8WVV9 542 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PPM1EQ8WY54 764 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TBCBQ99426 244 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 KRT12Q99456 494 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 LRRC1Q9BTT6 524 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TTPALQ9BTX7 342 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TUBB2BQ9BVA1 445 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ZCWPW1Q9H0M4 648 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 IP6K2Q9UHH9 426 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MAGED2Q9UNF1 606 aaPredicted RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 R3HDM2Q9Y2K5 976 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 PCDHA3Q9Y5H8 950 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ATG2AQ2TAZ0 1938 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 LRRD1A4D1F6 860 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MTMR11A4FU01 709 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MAP2K7O14733 419 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MDM4O15151 490 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MSI1O43347 362 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SEC24AO95486 1093 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 RALAP11233 206 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 NCAM1P13591 858 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 TYMPP19971 482 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 GPD1P21695 349 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 IRS1P35568 1242 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 KCNJ1P48048 391 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 HDAC4P56524 1084 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 MRPS5P82675 430 aaKnown RBP8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 ROR1Q01973 937 aa8.06□□□□□ -1.12
AC005840.3-201ENST00000541888 SLC25A11Q02978 314 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms