RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 MT-ND3P03897 115 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 AMHP03971 560 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 SERPINA6P08185 405 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 HARSP12081 509 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 PDGFRAP16234 1089 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 SSR1P43307 286 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 GLUD2P49448 558 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 HARS2P49590 506 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 ADAM17P78536 824 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 BASP1P80723 227 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 NET1Q7Z628 596 aaPredicted RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 PALM2Q8IXS6 379 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 ACMSDQ8TDX5 336 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 CLEC4CQ8WTT0 213 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 CSPG4P5Q96PW8 444 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 PAIP2Q9BPZ3 127 aaKnown RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 RAB6BQ9NRW1 208 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 RCOR3Q9P2K3 495 aaPredicted RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
PROM1-219ENST00000539194 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
PROM1-219ENST00000539194 ITM2AO43736 263 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ECM2O94769 699 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 HAUS5O94927 633 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PGK2P07205 417 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 TROVE2P10155 538 aaKnown RBP eCLIP7.17□□□□□ -1.26
PROM1-219ENST00000539194 GCLCP48506 637 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 ATXN1P54253 815 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 SLC34A1Q06495 639 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 DPYSQ14117 519 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PDE1CQ14123 709 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 STILQ15468 1287 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 LRRC8BQ6P9F7 803 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 BHLHA9Q7RTU4 235 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 TMPRSS6Q8IU80 811 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PSTKQ8IV42 348 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 PPTC7Q8NI37 304 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 EBF4Q9BQW3 602 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 SYNCQ9H7C4 482 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PLEKHA5Q9HAU0 1116 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ZNF212Q9UDV6 495 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 FZD10Q9ULW2 581 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 SORCS3Q9UPU3 1222 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 FRMPD3Q5JV73 1810 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 A0A087WZ62 844 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 WDR91A4D1P6 747 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 APOL1O14791 398 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 KCNN4O15554 427 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CACNG3O60359 315 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CCNT2O60583 730 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 CNTFP26441 200 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CCNHP51946 323 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 TNFAIP2Q03169 654 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 FYB2Q5VWT5 728 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 MTHFD1LQ6UB35 978 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 FBXO16Q8IX29 292 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 UNC5BQ8IZJ1 945 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 GPC2Q8N158 579 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 TTC39CQ8N584 583 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ZNF483Q8TF39 744 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 FAM172AQ8WUF8 416 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CPB2Q96IY4 423 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 FDXACB1Q9BRP7 624 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 B3GNT5Q9BYG0 378 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 GPAMQ9HCL2 828 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ALG13Q9NP73 1137 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 GDAP2Q9NXN4 497 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 DPP3Q9NY33 737 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ZC3H7BQ9UGR2 993 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 SLC7A8Q9UHI5 535 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 DOCK4Q8N1I0 1966 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CHD5Q8TDI0 1954 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 HGSO14964 777 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 RNF8O76064 485 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 LUC7L3O95232 432 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 PROCP04070 461 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 LGALS2P05162 132 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 SBK3P0C264 359 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 OSBPP22059 807 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CYP2F1P24903 491 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PLCB3Q01970 1234 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PAFAH1B3Q15102 231 aaKnown RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 PAQR9Q6ZVX9 377 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 APLFQ8IW19 511 aaPredicted RBP7.17□□□□□ -1.26
PROM1-219ENST00000539194 CCDC185Q8N715 623 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 STKLD1Q8NE28 680 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CCDC110Q8TBZ0 833 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 KCNV2Q8TDN2 545 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 UCMAQ8WVF2 138 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 NCSTNQ92542 709 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 SPATA33Q96N06 139 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 NT5C1AQ9BXI3 368 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 CALN1Q9BXU9 219 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PRDM16Q9HAZ2 1276 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 ANLNQ9NQW6 1124 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 PSAT1Q9Y617 370 aa7.17□□□□□ -1.26
PROM1-219ENST00000539194 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms