RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ADCY1Q08828 1119 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 DUSP4Q13115 394 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 PLD1Q13393 1074 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SLBPQ14493 270 aaKnown RBP eCLIP6.31□□□□□ -1.4
DDB1-210ENST00000538129 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 MAN2A1Q16706 1144 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 TCP11X2Q5H9J9 407 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 PPM1LQ5SGD2 360 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 TMEM201Q5SNT2 666 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SFRP5Q5T4F7 317 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 FBXL19Q6PCT2 694 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 TMC5Q6UXY8 1006 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 OSTM1Q86WC4 334 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 CREBRFQ8IUR6 639 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 CRYBG2Q8N1P7 616 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 C12orf76Q8N812 135 aaPredicted RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 OR6B3Q8NGW1 331 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 LMO3Q8TAP4 145 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 MYCBPAPQ8TBZ2 947 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SPPL2BQ8TCT7 592 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SUSD6Q92537 303 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 CNOT6LQ96LI5 555 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 RIPOR3Q96MK2 946 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 PKMYT1Q99640 499 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 MRPL45Q9BRJ2 306 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 PI4K2AQ9BTU6 479 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 FUCA2Q9BTY2 467 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 LRRC3Q9BY71 257 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 CYP4F11Q9HBI6 524 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 APOBEC3GQ9HC16 384 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 SAMSN1Q9NSI8 373 aaKnown RBP6.31□□□□□ -1.4
DDB1-210ENST00000538129 FANCLQ9NW38 375 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SLC5A6Q9Y289 635 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 SNX11Q9Y5W9 270 aa6.31□□□□□ -1.4
DDB1-210ENST00000538129 MYH10P35580 1976 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 SYCE3A1L190 88 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 MYBPHLA2RUH7 354 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 MTMR11A4FU01 709 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 KCNJ18B7U540 433 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 GREM1O60565 184 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ATP2C2O75185 946 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 LRRN2O75325 713 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 RFPL2O75678 378 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CLSTN1O94985 981 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 VNN2O95498 520 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 LRG1P02750 347 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 PRNPP04156 253 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CEACAM5P06731 702 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 OR4Q2P0C623 313 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 HAPLN1P10915 354 aaPredicted RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 PTPN2P17706 415 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 PTPN1P18031 435 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 TRIM21P19474 475 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 SPINK2P20155 84 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 TBXAS1P24557 533 aaPredicted RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 ACAT1P24752 427 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 MAGEA11P43364 429 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 KIR3DL1P43629 444 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ALDH1A3P47895 512 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 KCNQ1P51787 676 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 EPHB3P54753 998 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 NOP14P78316 857 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 MYL5Q02045 173 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 INCA1Q0VD86 236 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 KCNJ12Q14500 433 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 NCAPHQ15003 741 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CLUL1Q15846 466 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ZSCAN23Q3MJ62 389 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CFAP221Q4G0U5 840 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ANO6Q4KMQ2 910 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 VWA3BQ502W6 1294 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 SLC39A12Q504Y0 691 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 RARS2Q5T160 578 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 PRAMEF13Q5VWM6 474 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 IQCEQ6IPM2 695 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 SPOPLQ6IQ16 392 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 GBP6Q6ZN66 633 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 C4orf50Q6ZRC1 276 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 C11orf57Q6ZUT1 292 aaPredicted RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 ATAD1Q8NBU5 361 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ANKRD20A12PQ8NF67 263 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 SLC7A14Q8TBB6 771 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 SMG7Q92540 1137 aaKnown RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 NKD1Q969G9 470 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 JAKMIP2Q96AA8 810 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ZNF707Q96C28 371 aaPredicted RBP6.3□□□□□ -1.4
DDB1-210ENST00000538129 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDB1-210ENST00000538129 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 FAM81BQ96LP2 452 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 CEP295NLQ96MC4 621 aa6.3□□□□□ -1.4
DDB1-210ENST00000538129 ZNF512Q96ME7 567 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms