RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DNMT3BQ9UBC3 853 aaKnown RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 GRAP2O75791 330 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CDC25CP30307 473 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 PTPN9P43378 593 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 TUBP50607 506 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 IFI16Q16666 785 aaKnown RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 BTBD8Q5XKL5 378 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 GPR149Q86SP6 731 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 RXFP2Q8WXD0 754 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 OSBPL9Q96SU4 736 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 CORO1BQ9BR76 489 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCARB1-204ENST00000535005 OSER1Q9NX31 292 aa12.81□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
SCARB1-204ENST00000535005 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 H0YHG0 523 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 MYO1FO00160 1098 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 RHOP08100 348 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 RALAP11233 206 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 RARGP13631 454 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 PDGFRAP16234 1089 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 PFKLP17858 780 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GPD1P21695 349 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GABRR2P28476 465 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 RDXP35241 583 aaKnown RBP12.8□□□□□ -0.36
SCARB1-204ENST00000535005 RNASE9P60153 205 aaKnown RBP12.8□□□□□ -0.36
SCARB1-204ENST00000535005 OGDHQ02218 1023 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 ACAP1Q15027 740 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 TTMPQ5BVD1 217 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GAREM2Q75VX8 874 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 Q7L0L9 218 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 BNIPLQ7Z465 357 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 EMC1Q8N766 993 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 NIPA2Q8N8Q9 360 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 TPCN2Q8NHX9 752 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 MYLIPQ8WY64 445 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GUCD1Q96NT3 240 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 CDK5RAP1Q96SZ6 601 aaKnown RBP12.8□□□□□ -0.36
SCARB1-204ENST00000535005 NPY6RQ99463 290 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GDF3Q9NR23 364 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 IP6K2Q9UHH9 426 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 CAPN7Q9Y6W3 813 aa12.8□□□□□ -0.36
SCARB1-204ENST00000535005 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF197O14709 1029 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 CAPN9O14815 690 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 PROSCO94903 275 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 ENDOD1O94919 500 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 SDC4P31431 198 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 LSP1P33241 339 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 MAN1A1P33908 653 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 LTBRP36941 435 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF252P-AS1Q0IIN9 211 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 SLC25A52Q3SY17 297 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 DCAF6Q58WW2 860 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 RARS2Q5T160 578 aaKnown RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 HECTD3Q5T447 861 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 KLHDC10Q6PID8 442 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 CENPIQ92674 756 aaPredicted RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 PGAP3Q96FM1 320 aaPredicted RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 MSLNLQ96KJ4 702 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 LRRC1Q9BTT6 524 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 S1PR5Q9H228 398 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 PIDD1Q9HB75 910 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 OLA1Q9NTK5 396 aaKnown RBP12.79□□□□□ -0.36
SCARB1-204ENST00000535005 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 STAP1Q9ULZ2 295 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 NAALADL1Q9UQQ1 740 aa12.79□□□□□ -0.36
SCARB1-204ENST00000535005 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 CES2O00748 559 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 BUB1O43683 1085 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 TBX10O75333 385 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 MOSPD3O75425 235 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 IGLV3-25P01717 112 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 MYL4P12829 197 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 NCAM1P13591 858 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms