RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 FITM2Q8N6M3 262 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 FRMD1Q8N878 549 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 SYT2Q8N9I0 419 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 TRIML1Q8N9V2 468 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 POGLUT1Q8NBL1 392 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 RFWD2Q8NHY2 731 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 SMARCC2Q8TAQ2 1214 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 BPIFB1Q8TDL5 484 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PRPF31Q8WWY3 499 aaKnown RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM149B1Q96BN6 582 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ZNF764Q96H86 408 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PGAM5Q96HS1 289 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GBP5Q96PP8 586 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 MAP7D2Q96T17 732 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 GPR20Q99678 358 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CITED2Q99967 270 aaPredicted RBP4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ENKD1Q9H0I2 346 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC6A15Q9H2J7 730 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 DEF6Q9H4E7 631 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 KAT14Q9H8E8 782 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 PFDN4Q9NQP4 134 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ZDHHC7Q9NXF8 308 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 ALKBH4Q9NXW9 302 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 CD207Q9UJ71 328 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 MAFFQ9ULX9 164 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 AGTPBP1Q9UPW5 1226 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 AOX1Q06278 1338 aa4.65□□□□□ -1.67
AC055878.1-201ENST00000531858 A0A1W2PQ09 198 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 A0A1W2PQM1 296 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 C2orf78A6NCI8 922 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CDRT15L2A8MXV6 281 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 TAF4O00268 1085 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 PSMD14O00487 310 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SRGAP2O75044 1071 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 ADAMTS4O75173 837 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC22A3O75751 556 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 TOX4O94842 621 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 KIF20AO95235 890 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 TUBB4AP04350 444 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 C8BP07358 591 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CYP21A2P08686 494 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 C1SP09871 688 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 KCNA3P22001 575 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 RBL1P28749 1068 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 GARSP41250 739 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CAPZA2P47755 286 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 PCP4P48539 62 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 STAT5BP51692 787 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 RBM6P78332 1123 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 GOLGA8DPQ0D2H9 430 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 PDCLQ13371 301 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 BOP1Q14137 746 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 UBXN2BQ14CS0 331 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 MMEL1Q495T6 779 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 C9orf152Q5JTZ5 239 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CERCAMQ5T4B2 595 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 MSANTD2Q6P1R3 559 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 KLHL35Q6PF15 583 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 LAYNQ6UX15 382 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 ADGRG6Q86SQ4 1221 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CEP97Q8IW35 865 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 REXO1L1PQ8IX06 675 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CNTROBQ8N137 903 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 TTLL6Q8N841 843 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 NAT8LQ8N9F0 302 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SPC24Q8NBT2 197 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 FBXO18Q8NFZ0 1043 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SUN3Q8TAQ9 357 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 BORCS6Q96GS4 357 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 MASTLQ96GX5 879 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 REXO5Q96IC2 774 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 HIST1H2AAQ96QV6 131 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 MYOCQ99972 504 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 APOL6Q9BWW8 343 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 FTOQ9C0B1 505 aaKnown RBP eCLIP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 ABCG4Q9H172 646 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CCDC134Q9H6E4 229 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SH2D4AQ9H788 454 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 COPS7BQ9H9Q2 264 aaPredicted RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 KCNK9Q9NPC2 374 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 DECR2Q9NUI1 292 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 CPSF2Q9P2I0 782 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 UBA2Q9UBT2 640 aaPredicted RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 ANAPC5Q9UJX4 755 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC45A2Q9UMX9 530 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 HDAC5Q9UQL6 1122 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 YBX2Q9Y2T7 364 aaKnown RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 UBE2J1Q9Y385 318 aaPredicted RBP4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 NEU2Q9Y3R4 380 aa4.64□□□□□ -1.67
AC055878.1-201ENST00000531858 LOC105369274A0A096LPK9 316 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 LOC102723532A0A0G2JNH3 316 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PMS2P1A4D2B8 440 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM90A7PA6NKC0 464 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM90A22PA8MWA6 464 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM90A12PA8MX19 464 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 NUDT19A8MXV4 375 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FAM90A23PA8MXZ1 464 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 WNT10BO00744 389 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SYNCRIPO60506 623 aaKnown RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CBFA2T3O75081 653 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms