RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 RETSATQ6NUM9 610 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 OR8H2Q8N162 312 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 FIBCD1Q8N539 461 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 MAGEC3Q8TD91 643 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 ACTRT1Q8TDG2 376 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 ARHGEF26Q96DR7 871 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 C1orf50Q9BV19 199 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 CLEC4MQ9H2X3 399 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 PLA2G6O60733 806 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 CYP3A4P08684 503 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 ZNF286BP0CG31 522 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 XRCC4Q13426 336 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 PRCCQ92733 491 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 TMEM120AQ9BXJ8 343 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 KLHL31Q9H511 634 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 NRDE2Q9H7Z3 1164 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 XPO7Q9UIA9 1087 aaKnown RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 NFASCO94856 1347 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 GRK4P32298 578 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 SERPINH1P50454 418 aaKnown RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 PTK6Q13882 451 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 MFSD1Q9H3U5 465 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
PCDHGA6-201ENST00000517434 TRIM49D1C9J1S8 452 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 PSMG1O95456 288 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 KRT6AP02538 564 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 KRT6BP04259 564 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 LGALS2P05162 132 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 GLI1P08151 1106 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 COMTP21964 271 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 IGFBP4P22692 258 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 KRT6CP48668 564 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 ARPC4P59998 168 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 RRM2BQ7LG56 351 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 C19orf60Q96EN9 201 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 MBD2Q9UBB5 411 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.39
PCDHGA6-201ENST00000517434 FCGR1AP12314 374 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF23P17027 643 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 MAPK11Q15759 364 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 RNF135Q8IUD6 432 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 PHF21AQ96BD5 680 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCDC28BQ9BUN5 200 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 RAB6BQ9NRW1 208 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM32AQ9Y421 112 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 C3P01024 1663 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRPC5OSA6NMA1 111 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 PDZK1P1A8MUH7 402 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CKBP12277 381 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 MYL4P12829 197 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCDC130P13994 396 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 GEMP55040 296 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ITGADQ13349 1161 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 UGT3A1Q6NUS8 523 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 FBXL16Q8N461 479 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 FEZF2Q8TBJ5 459 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CENPTQ96BT3 561 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 OTUB1Q96FW1 271 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 WHRNQ9P202 907 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 SNPHO15079 494 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC37A4O43826 429 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 APRTP07741 180 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCNHP51946 323 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 LBRQ14739 615 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 GLRA4Q5JXX5 417 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 BBS7Q8IWZ6 715 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC5A5Q92911 643 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms