RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	ADGRG2	Q8IZP9	1017 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	PJA1	Q8NG27	643 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	OR8K1	Q8NGG5	319 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	CPLX3	Q8WVH0	158 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	CPA5	Q8WXQ8	436 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	CD101	Q93033	1021 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	AZIN2	Q96A70	460 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	ACD	Q96AP0	544 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZFYVE19	Q96K21	471 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	BTN2A3P	Q96KV6	586 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZSWIM1	Q9BR11	485 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	BBS2	Q9BXC9	721 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	SLC2A11	Q9BYW1	496 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	SMOC2	Q9H3U7	446 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	MRPL47	Q9HD33	250 aa	Known RBP	7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	LTB4R2	Q9NPC1	389 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	ACP6	Q9NPH0	428 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	SPHK2	Q9NRA0	654 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	DDIT4	Q9NX09	232 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	GTSE1	Q9NYZ3	720 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	DEC1	Q9P2X7	70 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	LCMT1	Q9UIC8	334 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	NOCT	Q9UK39	431 aa	Known RBP	7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	NDRG2	Q9UN36	371 aa	Known RBP	7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	SCIN	Q9Y6U3	715 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	FAM186A	A6NE01	2351 aa		7.78	□□□□□ -1.16
NR1I3-231	ENST00000512340	KRBA1	A5PL33	1030 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	GOLGA8S	H3BPF8	625 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TRDMT1	O14717	391 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	EPHB6	O15197	1021 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	HOXC11	O43248	304 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PAPSS1	O43252	624 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	LAMTOR5	O43504	91 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	IPO7	O95373	1038 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TRUB2	O95900	331 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CALCA	P01258	141 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CYP1A1	P04798	512 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	KRT3	P12035	628 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	ARSA	P15289	507 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	MMP8	P22894	467 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	SDC4	P31431	198 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PRKCI	P41743	596 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CCR3	P51677	355 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	NRL	P54845	237 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	FMO1	Q01740	532 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CENPC	Q03188	943 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TNK2	Q07912	1038 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CLEC16A	Q2KHT3	1053 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC25A52	Q3SY17	297 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	HSF5	Q4G112	596 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PTPN20	Q4JDL3	420 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	BRMS1L	Q5PSV4	323 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	RABGAP1L	Q5R372	815 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	LY6G5C	Q5SRR4	150 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	MPP7	Q5T2T1	576 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TRIM68	Q6AZZ1	485 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	GRAMD4	Q6IC98	578 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	ACAD10	Q6JQN1	1059 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DNAJC24	Q6P3W2	148 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZC3H14	Q6PJT7	736 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	LRRC31	Q6UY01	552 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	MMS22L	Q6ZRQ5	1243 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	FAM183BP	Q6ZVS7	135 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PHF13	Q86YI8	300 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DENND1C	Q8IV53	801 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	BBS7	Q8IWZ6	715 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DEFB106A	Q8N104	65 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	CPXM2	Q8N436	756 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	GPATCH11	Q8N954	259 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PRSS33	Q8NF86	280 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	KCNV2	Q8TDN2	545 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DQX1	Q8TE96	717 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DDI1	Q8WTU0	396 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DDX1	Q92499	740 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	RSPRY1	Q96DX4	576 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMA16	Q96EY4	203 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC2A13	Q96QE2	648 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PNKP	Q96T60	521 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	DDX23	Q9BUQ8	820 aa	Known RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	WDCP	Q9H6R7	721 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	LMAN1L	Q9HAT1	526 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	PARVA	Q9NVD7	372 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	OSER1	Q9NX31	292 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	SFMBT1	Q9UHJ3	866 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	AJAP1	Q9UKB5	411 aa	Predicted RBP	7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	NUDT5	Q9UKK9	219 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	OBSL1	O75147	1896 aa		7.77	□□□□□ -1.17
NR1I3-231	ENST00000512340	HELZ	P42694	1942 aa	Known RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	C5orf42	Q9H799	3197 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	TBC1D3B	A6NDS4	549 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	AKR1B15	C9JRZ8	316 aa	Predicted RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NEDD8-MDP1	E9PL57	170 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340		F5H5T6	163 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340		M0QYT0	321 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	ARNTL	O00327	626 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NRG2	O14511	850 aa	Predicted RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NPC1	O15118	1278 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	MDM4	O15151	490 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms