RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CRYBB1P53674 252 aaPredicted RBP15□□□□□ -0.01
DDX41-208ENST00000507955 PDK4Q16654 411 aa15□□□□□ -0.01
DDX41-208ENST00000507955 KLHL38Q2WGJ6 581 aa15□□□□□ -0.01
DDX41-208ENST00000507955 BSPRYQ5W0U4 402 aa15□□□□□ -0.01
DDX41-208ENST00000507955 ZNF534Q76KX8 674 aa15□□□□□ -0.01
DDX41-208ENST00000507955 GPRIN1Q7Z2K8 1008 aa15□□□□□ -0.01
DDX41-208ENST00000507955 BANPQ8N9N5 519 aa15□□□□□ -0.01
DDX41-208ENST00000507955 FAM111AQ96PZ2 611 aa15□□□□□ -0.01
DDX41-208ENST00000507955 TMEM237Q96Q45 408 aa15□□□□□ -0.01
DDX41-208ENST00000507955 POPDC2Q9HBU9 364 aa15□□□□□ -0.01
DDX41-208ENST00000507955 IL1RAPL1Q9NZN1 696 aa15□□□□□ -0.01
DDX41-208ENST00000507955 SEPT10Q9P0V9 454 aa15□□□□□ -0.01
DDX41-208ENST00000507955 SMG5Q9UPR3 1016 aaKnown RBP15□□□□□ -0.01
DDX41-208ENST00000507955 NUMBLQ9Y6R0 609 aa15□□□□□ -0.01
DDX41-208ENST00000507955 MYBPHLA2RUH7 354 aa15□□□□□ -0.01
DDX41-208ENST00000507955 CASTOR2A6NHX0 329 aa15□□□□□ -0.01
DDX41-208ENST00000507955 FAM72CH0Y354 149 aa15□□□□□ -0.01
DDX41-208ENST00000507955 M0QYT0 321 aa15□□□□□ -0.01
DDX41-208ENST00000507955 MFSD11O43934 449 aa15□□□□□ -0.01
DDX41-208ENST00000507955 MT-ND3P03897 115 aa15□□□□□ -0.01
DDX41-208ENST00000507955 F7P08709 466 aaPredicted RBP15□□□□□ -0.01
DDX41-208ENST00000507955 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
DDX41-208ENST00000507955 PLEKHG4Q58EX7 1191 aa15□□□□□ -0.01
DDX41-208ENST00000507955 FAM72AQ5TYM5 149 aa15□□□□□ -0.01
DDX41-208ENST00000507955 FAM72DQ6L9T8 149 aa15□□□□□ -0.01
DDX41-208ENST00000507955 CLEC20AQ6ZU45 233 aa15□□□□□ -0.01
DDX41-208ENST00000507955 OTOAQ7RTW8 1153 aa15□□□□□ -0.01
DDX41-208ENST00000507955 FAM72BQ86X60 149 aa15□□□□□ -0.01
DDX41-208ENST00000507955 ZNF276Q8N554 614 aa15□□□□□ -0.01
DDX41-208ENST00000507955 TRPV1Q8NER1 839 aa15□□□□□ -0.01
DDX41-208ENST00000507955 ZNF560Q96MR9 790 aa15□□□□□ -0.01
DDX41-208ENST00000507955 KLC2Q9H0B6 622 aa15□□□□□ -0.01
DDX41-208ENST00000507955 CRTAC1Q9NQ79 661 aa15□□□□□ -0.01
DDX41-208ENST00000507955 DCTN4Q9UJW0 460 aa15□□□□□ -0.01
DDX41-208ENST00000507955 TTLL3Q9Y4R7 772 aa15□□□□□ -0.01
DDX41-208ENST00000507955 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 INHBAP08476 426 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 MATKP42679 507 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 SEPT7Q16181 437 aaKnown RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 XKR4Q5GH76 650 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 GNASQ5JWF2 1037 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 LRRC6Q86X45 466 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 ERP27Q96DN0 273 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 ZNF570Q96NI8 536 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 NPHS2Q9NP85 383 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 PIGVQ9NUD9 493 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 DDX43Q9NXZ2 648 aaKnown RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 ST3GAL5Q9UNP4 418 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 CDY2AQ9Y6F7 541 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 IKBKGQ9Y6K9 419 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 LPXNO60711 386 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 ATP2A2P16615 1042 aaKnown RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 GBP2P32456 591 aaPredicted RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 CDC42EP1Q00587 391 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 AP1B1Q10567 949 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 SV2CQ496J9 727 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 SLC45A4Q5BKX6 768 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 UNC5AQ6ZN44 842 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 ZDHHC17Q8IUH5 632 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 SLC44A1Q8WWI5 657 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 TTC17Q96AE7 1141 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 RTP4Q96DX8 246 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 PLCD4Q9BRC7 762 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 DUSP16Q9BY84 665 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
DDX41-208ENST00000507955 KRT82Q9NSB4 513 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 SENP1Q9P0U3 644 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 STARD13Q9Y3M8 1113 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 USP3Q9Y6I4 520 aa14.99□□□□□ -0.01
DDX41-208ENST00000507955 C2orf71A6NGG8 1288 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 YJEFN3A6XGL0 299 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 TRIM49D1C9J1S8 452 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 E7ENQ6 273 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 EDF1O60869 148 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 DIAPH2O60879 1101 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 CSH1P0DML2 217 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 CSH2P0DML3 217 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 TARSP26639 723 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 TKTL1P51854 596 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 CLNS1AP54105 237 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX41-208ENST00000507955 CCNYQ8ND76 341 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 SENP8Q96LD8 212 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 PPP1R10Q96QC0 940 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 MECRQ9BV79 373 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 SLC13A1Q9BZW2 595 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 SNX10Q9Y5X0 201 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 XPO1O14980 1071 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 FYNP06241 537 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 NPR3P17342 541 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 AXLP30530 894 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 FKBP1BP68106 108 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms