RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CDK17Q00537 523 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 FMO1Q01740 532 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 MTA1Q13330 715 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 ZNF528Q3MIS6 628 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 DCAF6Q58WW2 860 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 FIGNQ5HY92 759 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 ZC3H14Q6PJT7 736 aaKnown RBP17.38■□□□□ 0.37
SNCA-209ENST00000506244 TPGS1Q6ZTW0 290 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 TAC4Q86UU9 113 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 ETFBKMTQ8IXQ9 262 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 FAM217AQ8IXS0 508 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
SNCA-209ENST00000506244 DDX50Q9BQ39 737 aaKnown RBP17.38■□□□□ 0.37
SNCA-209ENST00000506244 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
SNCA-209ENST00000506244 FAM204AQ9H8W3 233 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 DEC1Q9P2X7 70 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 STOML2Q9UJZ1 356 aa17.38■□□□□ 0.37
SNCA-209ENST00000506244 CACNA1HO95180 2353 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 H0Y858 1186 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 IRAK2O43187 625 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 RNF40O75150 1001 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 KAT7O95251 611 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 CYP1A1P04798 512 aaPredicted RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 FYNP06241 537 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 SLC2A3P11169 496 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 KDSRQ06136 332 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 ADGRF1Q5T601 910 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 FAM102AQ5T9C2 384 aaPredicted RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 NAIF1Q69YI7 327 aaPredicted RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 GRAMD4Q6IC98 578 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 PPP1R2P3Q6NXS1 205 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 Q6ZS52 159 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 BAP1Q92560 729 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 ATOH1Q92858 354 aaPredicted RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 AZIN2Q96A70 460 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 SEPT11Q9NVA2 429 aaKnown RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 DNAJC17Q9NVM6 304 aaKnown RBP17.37■□□□□ 0.37
SNCA-209ENST00000506244 STAP1Q9ULZ2 295 aa17.37■□□□□ 0.37
SNCA-209ENST00000506244 TYW5A2RUC4 315 aaKnown RBP17.36■□□□□ 0.37
SNCA-209ENST00000506244 LRRC53A6NM62 1247 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 CHURC1-FNTBB4DL54 471 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 TULP3O75386 442 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 PAPSS2O95340 614 aaPredicted RBP17.36■□□□□ 0.37
SNCA-209ENST00000506244 TRUB2O95900 331 aaKnown RBP17.36■□□□□ 0.37
SNCA-209ENST00000506244 PENKP01210 267 aaPredicted RBP17.36■□□□□ 0.37
SNCA-209ENST00000506244 CHRNB2P17787 502 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 NOS2P35228 1153 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 CXCL12P48061 93 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 CENPCQ03188 943 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 ASIC2Q16515 512 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 SFMBT2Q5VUG0 894 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 SYPL2Q5VXT5 272 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 C12orf40Q86WS4 652 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 XYLT1Q86Y38 959 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 CPA5Q8WXQ8 436 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 FAM126AQ9BYI3 521 aaPredicted RBP17.36■□□□□ 0.37
SNCA-209ENST00000506244 TTYH3Q9C0H2 523 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
SNCA-209ENST00000506244 A0A1W2PQJ5 194 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 GRAP2O75791 330 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 MMP8P22894 467 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 MATKP42679 507 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 TNFRSF4P43489 277 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 DGKGP49619 791 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 NRLP54845 237 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 NHLH1Q02575 133 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 CSTF1Q05048 431 aaKnown RBP17.35■□□□□ 0.37
SNCA-209ENST00000506244 TAF5Q15542 800 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 CLEC16AQ2KHT3 1053 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 HSF5Q4G112 596 aaPredicted RBP17.35■□□□□ 0.37
SNCA-209ENST00000506244 MPPE1Q53F39 396 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 NAT16Q8N8M0 369 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 ZNF557Q8N988 423 aaPredicted RBP17.35■□□□□ 0.37
SNCA-209ENST00000506244 TERB1Q8NA31 727 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 ADAM32Q8TC27 787 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 DDI1Q8WTU0 396 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 FAM122AQ96E09 287 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 SLC39A13Q96H72 371 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
SNCA-209ENST00000506244 AGPAT1Q99943 283 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 FBRSL1Q9HCM7 1045 aaKnown RBP17.35■□□□□ 0.37
SNCA-209ENST00000506244 DDIT4Q9NX09 232 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 PAXBP1Q9Y5B6 917 aa17.35■□□□□ 0.37
SNCA-209ENST00000506244 TBC1D3BA6NDS4 549 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 ACSL4O60488 711 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 CALB1P05937 261 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 SP9P0CG40 484 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 CCR1P32246 355 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 PLA2G5P39877 138 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 PBX1P40424 430 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 SLC6A11P48066 632 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 MRPS21P82921 87 aaKnown RBP17.34■□□□□ 0.37
SNCA-209ENST00000506244 GAS6Q14393 721 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms