RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MATKP42679 507 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 NDUFV1P49821 464 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 RABGGTBP53611 331 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 EFHC1Q5JVL4 640 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 CASC4Q6P4E1 433 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 C4orf22Q6V702 233 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 OSTM1Q86WC4 334 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ARRDC4Q8NCT1 418 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 HTR3CQ8WXA8 447 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SLC7A6OSQ96CW6 309 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 QKIQ96PU8 341 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PTPN18Q99952 460 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 MECRQ9BV79 373 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 GDAP2Q9NXN4 497 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 C2orf71A6NGG8 1288 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ZNF487B1APH4 448 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CREB3O43889 395 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 RFPL1O75677 317 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 BEST1O76090 585 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ANP32DO95626 131 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 MYL3P08590 195 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 RPSAP08865 295 aaKnown RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 VAV1P15498 845 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 MAP2K2P36507 400 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 LILRA4P59901 499 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CRADDP78560 199 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ZBTB16Q05516 673 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 AP1B1Q10567 949 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 NME3Q13232 169 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ANKRD20A2Q5SQ80 823 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 UBXN11Q5T124 520 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ANKRD20A1Q5TYW2 823 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ANKRD20A3Q5VUR7 823 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 BSPRYQ5W0U4 402 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 UNC5BQ8IZJ1 945 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 GSDMBQ8TAX9 411 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 LRRC39Q96DD0 335 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 TNIP3Q96KP6 325 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ZNF180Q9UJW8 692 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 WDR27A2RRH5 827 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 MBLAC1A4D2B0 266 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 XPOTO43592 962 aaKnown RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CCND1P24385 295 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 AXLP30530 894 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 PNPLA4P41247 253 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 BEX3Q00994 111 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 SLC25A52Q3SY17 297 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 SV2CQ496J9 727 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 OLFML2BQ68BL8 750 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 STRADAQ7RTN6 431 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CLNKQ7Z7G1 428 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 TLK2Q86UE8 772 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CHSY1Q86X52 802 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 COLGALT1Q8NBJ5 622 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 B3GALNT2Q8NCR0 500 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CCNYQ8ND76 341 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 ZNF398Q8TD17 642 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 TMEM120AQ9BXJ8 343 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 KCNK13Q9HB14 408 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CACNG4Q9UBN1 327 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 CPA4Q9UI42 421 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
CHMP3-209ENST00000494623 PLLPQ9Y342 182 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 IPPQ9Y573 584 aa11.58□□□□□ -0.56
CHMP3-209ENST00000494623 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 CYB561D2O14569 222 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 DGKIO75912 1065 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 KRT38O76015 456 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 KCNE1P15382 129 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 TPSB2P20231 275 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 PSEN2P49810 448 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 RASSF2P50749 326 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SLC8A3P57103 927 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SARNPP82979 210 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 CBLBQ13191 982 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 TPSAB1Q15661 275 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SMAD1Q15797 465 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 PARP6Q2NL67 630 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 NBPF20Q3BBV1 942 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 ARCQ7LC44 396 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 NME8Q8N427 588 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 INPP5DQ92835 1189 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 MED10Q9BTT4 135 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 DUSP16Q9BY84 665 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 DNAI2Q9GZS0 605 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms