RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 KDM7AQ6ZMT4 941 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 C4orf50Q6ZRC1 276 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 DENND5BQ6ZUT9 1274 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 HS2ST1Q7LGA3 356 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 ACOT1Q86TX2 421 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 KBTBD6Q86V97 674 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 WDR5BQ86VZ2 330 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 C12orf40Q86WS4 652 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 CCDC13Q8IYE1 715 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 B3GALNT2Q8NCR0 500 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 OSCP1Q8WVF1 389 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 SPDL1Q96EA4 605 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 MSANTD3Q96H12 275 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 C8orf48Q96LL4 319 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 ALS2CR12Q96Q35 445 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 HHIPQ96QV1 700 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 TWNKQ96RR1 684 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 FNBP1Q96RU3 617 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 SMOQ99835 787 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 IER2Q9BTL4 223 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 SNX25Q9H3E2 840 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 KIF9Q9HAQ2 790 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 APOBEC3GQ9HC16 384 aaKnown RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 ZDHHC4Q9NPG8 344 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 RXFP3Q9NSD7 469 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 THG1LQ9NWX6 298 aaKnown RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 SMPD4Q9NXE4 827 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 UXTQ9UBK9 157 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-234ENST00000493923 USP18Q9UMW8 372 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 MAPK8IP1Q9UQF2 711 aa8.58□□□□□ -1.04
HDAC6-234ENST00000493923 CACNA1EQ15878 2313 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 FAM237AA0A1B0GTK4 181 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 DCDC2BA2VCK2 349 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CFAP73A6NFT4 308 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 A8MXQ7 604 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 AKR1B15C9JRZ8 316 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 K7EQS6 105 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 DCLK1O15075 740 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 FANCGO15287 622 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 OLFM2O95897 454 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 OAS1P00973 400 aaKnown RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 HLA-DRAP01903 254 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 NR3C1P04150 777 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CYP17A1P05093 508 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CMA1P23946 247 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TNNC1P63316 161 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 PPP3CAQ08209 521 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 DPYDQ12882 1025 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 XRCC4Q13426 336 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 BIRC3Q13489 604 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TRPC3Q13507 836 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 NCOA4Q13772 614 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM14Q14142 442 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 PDGFRLQ15198 375 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 ZNF699Q32M78 642 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 LACTB2Q53H82 288 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 RNF187Q5TA31 235 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 EMBQ6PCB8 327 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 GPRIN1Q7Z2K8 1008 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 DGLUCYQ7Z3D6 616 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 LONP2Q86WA8 852 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 SMYD4Q8IYR2 804 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 FUKQ8N0W3 1084 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 C12orf29Q8N999 325 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 RPLP0P6Q8NHW5 317 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 P2RY11Q96G91 374 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CCSER2Q9H7U1 834 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 EXOC1Q9NV70 894 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 TRPM5Q9NZQ8 1165 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CHORDC1Q9UHD1 332 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-234ENST00000493923 INVSQ9Y283 1065 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 CPQQ9Y646 472 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 NUP205Q92621 2012 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 THADAQ6YHU6 1953 aa8.57□□□□□ -1.04
HDAC6-234ENST00000493923 PI4KAP42356 2102 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM24O15164 1050 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 AXIN1O15169 862 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 COCHO43405 550 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 BUB1BO60566 1050 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 AKAP3O75969 853 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 FAM107AO95990 144 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms