RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZNF394Q53GI3 561 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 NUDT18Q6ZVK8 323 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
COL2A1-207ENST00000490609 CHCHD4Q8N4Q1 142 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 DNASE2BQ8WZ79 361 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 TMEM8AQ9HCN3 771 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 LSM7Q9UK45 103 aaKnown RBP16.33■□□□□ 0.2
COL2A1-207ENST00000490609 SLCO1B1Q9Y6L6 691 aa16.33■□□□□ 0.2
COL2A1-207ENST00000490609 SH3BP5O60239 455 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 OPHN1O60890 802 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 GABBR2O75899 941 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 HMBSP08397 361 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 C7P10643 843 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 CORO1AP31146 461 aaKnown RBP16.32■□□□□ 0.2
COL2A1-207ENST00000490609 PSEN1P49768 467 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 EFEMP1Q12805 493 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 PM20D1Q6GTS8 502 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 RAB44Q7Z6P3 723 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-207ENST00000490609 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
COL2A1-207ENST00000490609 SORCS1Q8WY21 1168 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 TOE1Q96GM8 510 aaKnown RBP16.32■□□□□ 0.2
COL2A1-207ENST00000490609 DOCK9Q9BZ29 2069 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 SLC32A1Q9H598 525 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 CISHQ9NSE2 258 aa16.32■□□□□ 0.2
COL2A1-207ENST00000490609 KNTC1P50748 2209 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 CBFA2T3O75081 653 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 PRKCHP24723 683 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 PSMC2P35998 433 aaKnown RBP16.31■□□□□ 0.2
COL2A1-207ENST00000490609 TPMTP51580 245 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 ADAM9Q13443 819 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 ARHGAP17Q68EM7 881 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 SDE2Q6IQ49 451 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 DENND1CQ8IV53 801 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 SMYD4Q8IYR2 804 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-207ENST00000490609 TMEM176AQ96HP8 235 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 HEXIM2Q96MH2 286 aaKnown RBP16.31■□□□□ 0.2
COL2A1-207ENST00000490609 IL21RQ9HBE5 538 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 RASAL2Q9UJF2 1139 aa16.31■□□□□ 0.2
COL2A1-207ENST00000490609 TMEM8BA6NDV4 472 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 KIF20AO95235 890 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 IGLV3-19P01714 112 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 CD6P30203 668 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 SYKP43405 635 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 COG7P83436 770 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 ZNF234Q14588 700 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 TRIP4Q15650 581 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-207ENST00000490609 PLEKHG6Q3KR16 790 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 CBWD6Q4V339 395 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 CBWD3Q5JTY5 395 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 CBWD5Q5RIA9 395 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 KRT39Q6A163 491 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 KIAA1324Q6UXG2 1013 aaKnown RBP16.3■□□□□ 0.2
COL2A1-207ENST00000490609 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 ZC3H3Q8IXZ2 948 aaKnown RBP16.3■□□□□ 0.2
COL2A1-207ENST00000490609 CPXM2Q8N436 756 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 UBR7Q8N806 425 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 ZNF510Q9Y2H8 683 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
COL2A1-207ENST00000490609 RALAP11233 206 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 GTF2H1P32780 548 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 CHKAP35790 457 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 GRIK2Q13002 908 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 RABEPKQ7Z6M1 372 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 KIAA0907Q7Z7F0 614 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-207ENST00000490609 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 TMPRSS6Q8IU80 811 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 HDDC3Q8N4P3 179 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 GPR174Q9BXC1 333 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
COL2A1-207ENST00000490609 ARID1BQ8NFD5 2236 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-207ENST00000490609 SLC12A8A0AV02 714 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 METTL12A8MUP2 240 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 NDUFS2O75306 463 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 SYPP08247 313 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 NCAM1P13591 858 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-207ENST00000490609 SGSHP51688 502 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 TKTL1P51854 596 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 ATXN3P54252 364 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-207ENST00000490609 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL2A1-207ENST00000490609 PDE4CQ08493 712 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 SLC14A1Q13336 389 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
COL2A1-207ENST00000490609 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 PKDCCQ504Y2 493 aa16.28■□□□□ 0.2
COL2A1-207ENST00000490609 DBX2Q6ZNG2 339 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms